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3 homologs were found in PanDaTox collection
for query gene
Rpal_1500
on replicon NC_011004
Organism:
Rhodopseudomonas palustris TIE-1
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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score
E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011004
Rpal_1500
integrase family protein
100
326 aa
667
Rhodopseudomonas palustris TIE-1
Bacteria
normal
1
n/a
-
NC_009468
Acry_3449
hypothetical protein
32.26
312 aa
45.8
0.001
Acidiphilium cryptum JF-5
Bacteria
decreased coverage
0.00537518
n/a
-
NC_011830
Dhaf_3952
integrase family protein
39.68
310 aa
43.5
0.006
Desulfitobacterium hafniense DCB-2
Bacteria
normal
1
n/a
-
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