5 homologs were found in PanDaTox collection
for query gene RoseRS_4188 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_4188  hypothetical protein  100 
 
 
468 aa  960    Roseiflexus sp. RS-1  Bacteria  normal  hitchhiker  0.000111966 
 
 
-
 
NC_009767  Rcas_0923  hypothetical protein  82.78 
 
 
474 aa  776    Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.946452  normal 
 
 
-
 
NC_009523  RoseRS_0065  secreted hydrolase-like protein  27.47 
 
 
376 aa  45.8  0.002  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.337885 
 
 
-
 
NC_010506  Swoo_4108  hypothetical protein  22.11 
 
 
390 aa  45.1  0.002  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0002  secreted hydrolase-like protein  27.27 
 
 
387 aa  43.1  0.01  Roseiflexus castenholzii DSM 13941  Bacteria  decreased coverage  0.000706868  unclonable  0.000000000576659 
 
 
-
 
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