More than 300 homologs were found in PanDaTox collection
for query gene RoseRS_3589 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009523  RoseRS_3589  response regulator receiver protein  100 
 
 		 126 aa  252  1.0000000000000001e-66  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.517802 
 
 
-
 
NC_009767  Rcas_4276  response regulator receiver protein  66.13 
 
 		 128 aa  159  1e-38  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.541765  normal  0.0524203 
 
 
-
 
NC_009523  RoseRS_3612  response regulator receiver protein  42.02 
 
 		 128 aa  89.7  1e-17  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_4302  response regulator receiver protein  40.34 
 
 		 124 aa  85.1  3e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007604  Synpcc7942_1817  response regulator receiver domain-containing protein  37.82 
 
 		 121 aa  81.6  0.000000000000003  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  0.202035 
 
 
-
 
NC_009972  Haur_4908  response regulator receiver protein  34.19 
 
 		 130 aa  77.8  0.00000000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00100675  n/a   
 
 
-
 
NC_013730  Slin_2507  two component, sigma54 specific, transcriptional regulator, Fis family  36.97 
 
 		 488 aa  77.4  0.00000000000006  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.182398 
 
 
-
 
NC_010501  PputW619_3482  two component transcriptional regulator  37.6 
 
 		 231 aa  77.4  0.00000000000007  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002947  PP_4157  winged helix family two component transcriptional regulator  36.8 
 
 		 231 aa  76.3  0.0000000000001  Pseudomonas putida KT2440  Bacteria  normal  0.507569  normal  1 
 
 
-
 
NC_009512  Pput_1711  two component transcriptional regulator  36.8 
 
 		 231 aa  76.3  0.0000000000001  Pseudomonas putida F1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_3077  response regulator receiver protein  36.89 
 
 		 124 aa  76.3  0.0000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.74045  normal  1 
 
 
-
 
NC_007492  Pfl01_4029  two component transcriptional regulator  39.34 
 
 		 241 aa  75.5  0.0000000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.871415 
 
 
-
 
NC_010322  PputGB1_3729  two component transcriptional regulator  36.8 
 
 		 231 aa  75.9  0.0000000000002  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009620  Smed_3764  multi-sensor hybrid histidine kinase  38.18 
 
 		 917 aa  75.1  0.0000000000003  Sinorhizobium medicae WSM419  Bacteria  normal  0.432635  normal  1 
 
 
-
 
NC_009620  Smed_3763  response regulator receiver protein  35.04 
 
 		 121 aa  73.9  0.0000000000006  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_3308  response regulator receiver protein  35.54 
 
 		 130 aa  73.9  0.0000000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.678314  normal  0.215079 
 
 
-
 
NC_011884  Cyan7425_2947  multi-sensor signal transduction histidine kinase  31.67 
 
 		 503 aa  73.9  0.0000000000007  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_0748  response regulator receiver protein  35.29 
 
 		 123 aa  73.6  0.0000000000008  Cyanothece sp. PCC 7425  Bacteria  normal  0.390262  normal  0.11236 
 
 
-
 
NC_009523  RoseRS_3877  response regulator receiver protein  35.59 
 
 		 130 aa  73.6  0.0000000000009  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_4732  response regulator receiver protein  38.18 
 
 		 123 aa  72.8  0.000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.539442  n/a   
 
 
-
 
NC_007005  Psyr_2051  response regulator receiver:transcriptional regulatory protein, C-terminal  37.9 
 
 		 230 aa  72  0.000000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.191031  normal  0.53595 
 
 
-
 
NC_011831  Cagg_0497  response regulator receiver protein  35.14 
 
 		 124 aa  72.4  0.000000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.41839  hitchhiker  0.0000227207 
 
 
-
 
NC_013422  Hneap_0134  response regulator receiver protein  34.21 
 
 		 123 aa  72.4  0.000000000002  Halothiobacillus neapolitanus c2  Bacteria  normal  0.81317  n/a   
 
 
-
 
NC_010511  M446_3554  response regulator receiver protein  33.06 
 
 		 125 aa  72  0.000000000003  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.0426067 
 
 
-
 
NC_010511  M446_3558  multi-sensor hybrid histidine kinase  38.18 
 
 		 984 aa  72  0.000000000003  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.299477 
 
 
-
 
NC_010511  M446_2804  response regulator receiver protein  39.02 
 
 		 128 aa  71.2  0.000000000004  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_1706  response regulator receiver protein  31.93 
 
 		 131 aa  70.9  0.000000000005  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004578  PSPTO_2246  KDP operon transcriptional regulatory protein kdpE  38.14 
 
 		 230 aa  70.5  0.000000000007  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.683582  n/a   
 
 
-
 
NC_009675  Anae109_0930  response regulator receiver protein  38.84 
 
 		 456 aa  70.5  0.000000000007  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.139996  normal  0.100238 
 
 
-
 
NC_004578  PSPTO_4080  DNA-binding response regulator, LuxR family  35.25 
 
 		 222 aa  70.5  0.000000000008  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.542388  n/a   
 
 
-
 
NC_010172  Mext_4215  response regulator receiver  31.71 
 
 		 124 aa  69.7  0.00000000001  Methylobacterium extorquens PA1  Bacteria  normal  0.0783308  normal  0.412692 
 
 
-
 
NC_009767  Rcas_4445  two component transcriptional regulator  35.83 
 
 		 229 aa  69.7  0.00000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.14031 
 
 
-
 
NC_007517  Gmet_2789  response regulator receiver domain-containing protein  33.61 
 
 		 122 aa  69.7  0.00000000001  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_4585  response regulator receiver protein  31.71 
 
 		 124 aa  69.7  0.00000000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0945273  normal  0.0607582 
 
 
-
 
NC_007796  Mhun_2690  response regulator receiver domain-containing protein  32.76 
 
 		 124 aa  70.1  0.00000000001  Methanospirillum hungatei JF-1  Archaea  normal  1  normal  0.0818688 
 
 
-
 
NC_008463  PA14_43340  two-component response regulator KdpE  36.51 
 
 		 230 aa  70.1  0.00000000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.807414  normal  1 
 
 
-
 
NC_009656  PSPA7_3636  two-component response regulator KdpE  36.51 
 
 		 230 aa  68.9  0.00000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.9171  n/a   
 
 
-
 
NC_009972  Haur_1097  response regulator receiver protein  34.82 
 
 		 131 aa  68.9  0.00000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00801176  n/a   
 
 
-
 
NC_010725  Mpop_4732  response regulator receiver protein  32.23 
 
 		 133 aa  68.9  0.00000000002  Methylobacterium populi BJ001  Bacteria  normal  0.788518  decreased coverage  0.0029072 
 
 
-
 
NC_009972  Haur_1215  response regulator receiver protein  33.05 
 
 		 120 aa  68.9  0.00000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009973  Haur_5197  response regulator receiver protein  30.36 
 
 		 134 aa  68.9  0.00000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_4136  response regulator receiver Signal transduction histidine kinase  30.25 
 
 		 440 aa  68.2  0.00000000003  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  0.00000660181  hitchhiker  0.00876613 
 
 
-
 
NC_010571  Oter_1720  two component LuxR family transcriptional regulator  33.06 
 
 		 301 aa  68.6  0.00000000003  Opitutus terrae PB90-1  Bacteria  normal  0.162572  normal  0.616267 
 
 
-
 
NC_010505  Mrad2831_3565  response regulator receiver protein  32.77 
 
 		 126 aa  68.2  0.00000000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0960945  normal  1 
 
 
-
 
NC_009523  RoseRS_0761  two component transcriptional regulator  34.17 
 
 		 229 aa  68.2  0.00000000004  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.179681 
 
 
-
 
NC_007955  Mbur_0695  response regulator receiver  33.61 
 
 		 170 aa  68.2  0.00000000004  Methanococcoides burtonii DSM 6242  Archaea  normal  0.412637  n/a   
 
 
-
 
NC_009972  Haur_0593  response regulator receiver sensor signal transduction histidine kinase  33.65 
 
 		 397 aa  67.4  0.00000000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.177467  n/a   
 
 
-
 
NC_007413  Ava_3776  response regulator receiver domain-containing protein  31.82 
 
 		 120 aa  67  0.00000000009  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.143561 
 
 
-
 
NC_011757  Mchl_3691  histidine kinase  32.77 
 
 		 1071 aa  66.6  0.0000000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013522  Taci_0090  two component transcriptional regulator, winged helix family  37.5 
 
 		 228 aa  66.6  0.0000000001  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_3382  ATPase domain-containing protein  32.77 
 
 		 1071 aa  66.2  0.0000000002  Methylobacterium extorquens PA1  Bacteria  normal  0.525319  normal  0.740946 
 
 
-
 
NC_013525  Tter_0789  response regulator receiver protein  35.29 
 
 		 278 aa  66.2  0.0000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_0904  two component transcriptional regulator, winged helix family  37.4 
 
 		 254 aa  65.9  0.0000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.936287  normal  0.32173 
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  29.03 
 
 		 383 aa  65.5  0.0000000003  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_012560  Avin_10580  Response regulator  33.88 
 
 		 229 aa  65.1  0.0000000003  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_1220  response regulator receiver protein  31.71 
 
 		 130 aa  65.1  0.0000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_4135  periplasmic sensor hybrid histidine kinase  31.82 
 
 		 922 aa  65.1  0.0000000003  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  0.000000370631  normal  0.0140414 
 
 
-
 
NC_010505  Mrad2831_0214  response regulator receiver protein  32.76 
 
 		 139 aa  65.1  0.0000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  hitchhiker  0.00485635  normal  1 
 
 
-
 
NC_010814  Glov_1377  two component, sigma54 specific, transcriptional regulator, Fis family  35.96 
 
 		 462 aa  65.5  0.0000000003  Geobacter lovleyi SZ  Bacteria  normal  0.244526  n/a   
 
 
-
 
NC_011884  Cyan7425_1392  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  32.2 
 
 		 584 aa  64.7  0.0000000004  Cyanothece sp. PCC 7425  Bacteria  normal  0.623748  normal  1 
 
 
-
 
NC_011729  PCC7424_2022  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  31.93 
 
 		 589 aa  64.7  0.0000000004  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_013132  Cpin_1224  two component transcriptional regulator, winged helix family  33.9 
 
 		 227 aa  64.7  0.0000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0117785  hitchhiker  0.00926138 
 
 
-
 
NC_008340  Mlg_0356  response regulator receiver protein  30.51 
 
 		 121 aa  64.7  0.0000000004  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0780111  normal  0.957515 
 
 
-
 
NC_011662  Tmz1t_1368  response regulator receiver protein  34.48 
 
 		 125 aa  64.3  0.0000000005  Thauera sp. MZ1T  Bacteria  normal  0.136056  n/a   
 
 
-
 
NC_010511  M446_0592  integral membrane sensor hybrid histidine kinase  32.23 
 
 		 1113 aa  64.3  0.0000000005  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.0114606 
 
 
-
 
NC_013172  Bfae_07910  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  34.48 
 
 		 239 aa  64.3  0.0000000005  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_0790  multi-sensor signal transduction histidine kinase  29.41 
 
 		 566 aa  63.9  0.0000000006  Cyanothece sp. PCC 7425  Bacteria  normal  0.391268  normal  1 
 
 
-
 
NC_007760  Adeh_0873  response regulator receiver domain-containing protein  36.75 
 
 		 483 aa  63.9  0.0000000006  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.0633299  n/a   
 
 
-
 
NC_011891  A2cp1_0922  response regulator receiver protein  38.05 
 
 		 459 aa  63.9  0.0000000006  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008786  Veis_2177  response regulator receiver protein  30.77 
 
 		 120 aa  64.3  0.0000000006  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011729  PCC7424_5086  response regulator receiver modulated diguanylate cyclase  31.25 
 
 		 465 aa  63.9  0.0000000006  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_010814  Glov_1118  response regulator receiver sensor signal transduction histidine kinase  30.25 
 
 		 452 aa  63.9  0.0000000007  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.000972917  n/a   
 
 
-
 
NC_013173  Dbac_0628  two component, sigma54 specific, transcriptional regulator, Fis family  31.9 
 
 		 446 aa  63.9  0.0000000007  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_3134  response regulator receiver protein  32.2 
 
 		 200 aa  63.9  0.0000000007  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007413  Ava_2562  response regulator receiver Signal transduction histidine kinase  29.46 
 
 		 437 aa  63.5  0.0000000008  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008312  Tery_4000  response regulator receiver protein  28.33 
 
 		 125 aa  63.5  0.0000000008  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  0.508878 
 
 
-
 
NC_009972  Haur_0604  response regulator receiver protein  28.93 
 
 		 123 aa  63.9  0.0000000008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.72319  n/a   
 
 
-
 
NC_013422  Hneap_2266  two component transcriptional regulator PhoB, winged helix family  35.25 
 
 		 230 aa  63.5  0.0000000009  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
-
 
NC_010580  Bind_3781  two component transcriptional regulator  33.33 
 
 		 238 aa  63.5  0.0000000009  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_0809  response regulator receiver sensor signal transduction histidine kinase  33.88 
 
 		 367 aa  63.2  0.000000001  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013440  Hoch_6548  response regulator receiver sensor signal transduction histidine kinase  32.46 
 
 		 397 aa  63.5  0.000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.543575 
 
 
-
 
NC_011831  Cagg_0393  two component transcriptional regulator, winged helix family  34.4 
 
 		 227 aa  62.8  0.000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  0.202895 
 
 
-
 
NC_010505  Mrad2831_2672  multi-sensor hybrid histidine kinase  32.48 
 
 		 991 aa  63.2  0.000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.646953  normal  1 
 
 
-
 
NC_011145  AnaeK_0918  response regulator receiver protein  36.28 
 
 		 458 aa  63.5  0.000000001  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_0257  response regulator receiver  36.97 
 
 		 241 aa  63.2  0.000000001  Thermobifida fusca YX  Bacteria  normal  0.926332  n/a   
 
 
-
 
NC_011989  Avi_3499  transcriptional regulator LuxR family  32.79 
 
 		 312 aa  63.5  0.000000001  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_2150  response regulator receiver Signal transduction histidine kinase  31.36 
 
 		 443 aa  63.2  0.000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.394463 
 
 
-
 
NC_007908  Rfer_0566  response regulator receiver domain-containing protein  30.25 
 
 		 120 aa  62.8  0.000000001  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_0161  response regulator receiver protein  33.33 
 
 		 132 aa  63.2  0.000000001  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_0599  response regulator receiver modulated diguanylate cyclase  35.9 
 
 		 313 aa  63.2  0.000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.464892  normal  0.548622 
 
 
-
 
NC_013161  Cyan8802_1264  response regulator receiver protein  30.58 
 
 		 122 aa  63.5  0.000000001  Cyanothece sp. PCC 8802  Bacteria  normal  0.0578681  hitchhiker  0.00155192 
 
 
-
 
NC_011726  PCC8801_1234  response regulator receiver protein  30.58 
 
 		 122 aa  63.5  0.000000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010338  Caul_3286  two component transcriptional regulator  35.34 
 
 		 239 aa  62.8  0.000000002  Caulobacter sp. K31  Bacteria  normal  0.0994211  normal  1 
 
 
-
 
NC_007604  Synpcc7942_1816  periplasmic sensor hybrid histidine kinase  33.62 
 
 		 977 aa  62.8  0.000000002  Synechococcus elongatus PCC 7942  Bacteria  normal  0.218789  normal  0.39116 
 
 
-
 
NC_009943  Dole_1364  two component, sigma54 specific, Fis family transcriptional regulator  32.26 
 
 		 485 aa  62.4  0.000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_013422  Hneap_0135  integral membrane sensor hybrid histidine kinase  33.64 
 
 		 858 aa  62.4  0.000000002  Halothiobacillus neapolitanus c2  Bacteria  normal  0.711395  n/a   
 
 
-
 
NC_009767  Rcas_0674  response regulator receiver protein  30 
 
 		 120 aa  62.4  0.000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.0682036 
 
 
-
 
NC_013440  Hoch_2175  response regulator receiver sensor signal transduction histidine kinase  30.25 
 
 		 395 aa  62.4  0.000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.924768  normal  0.400775 
 
 
-
 
NC_013510  Tcur_0578  two component transcriptional regulator, winged helix family  34.15 
 
 		 244 aa  62.4  0.000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_3838  response regulator receiver domain-containing protein  34.17 
 
 		 234 aa  62  0.000000003  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.0000539223  normal  1 
 
 
-
 
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