10 homologs were found in PanDaTox collection
for query gene RoseRS_3347 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_3347  TadE family protein  100 
 
 
140 aa  286  5.0000000000000004e-77  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_4160  TadE family protein  85.61 
 
 
131 aa  233  6e-61  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.358976 
 
 
-
 
NC_011879  Achl_4440  TadE family protein  35.64 
 
 
126 aa  49.7  0.00001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0344205 
 
 
-
 
NC_008541  Arth_2929  TadE family protein  41.3 
 
 
129 aa  42.7  0.002  Arthrobacter sp. FB24  Bacteria  normal  0.197954  n/a   
 
 
-
 
NC_009253  Dred_2112  TadE family protein  29.69 
 
 
137 aa  42.7  0.002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1688  TadE family protein  39.47 
 
 
175 aa  42.7  0.002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.598074  hitchhiker  0.000000154995 
 
 
-
 
NC_013525  Tter_1023  TadE family protein  27.07 
 
 
135 aa  42.7  0.002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011886  Achl_2635  TadE family protein  30.51 
 
 
148 aa  42  0.003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.857387 
 
 
-
 
NC_009485  BBta_1525  hypothetical protein  30.86 
 
 
174 aa  40.4  0.008  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.815078 
 
 
-
 
NC_011831  Cagg_0055  TadE family protein  42.22 
 
 
197 aa  40.4  0.008  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.258579  normal  0.372833 
 
 
-
 
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