More than 300 homologs were found in PanDaTox collection
for query gene RoseRS_2313 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_2313  extracellular solute-binding protein  100 
 
 
901 aa  1825    Roseiflexus sp. RS-1  Bacteria  normal  0.708196  normal 
 
 
-
 
NC_009523  RoseRS_2315  extracellular solute-binding protein  80.58 
 
 
925 aa  1464    Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3152  extracellular solute-binding protein  65.31 
 
 
970 aa  1188    Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7906  extracellular solute-binding protein family 1  26.98 
 
 
420 aa  102  2e-20  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.819994  normal 
 
 
-
 
NC_013517  Sterm_0719  extracellular solute-binding protein family 1  25.07 
 
 
413 aa  102  5e-20  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.0236757  n/a   
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  25.93 
 
 
427 aa  99  4e-19  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2267  extracellular solute-binding protein family 1  28.13 
 
 
445 aa  89  3e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00064551 
 
 
-
 
NC_010320  Teth514_0397  extracellular solute-binding protein  24.25 
 
 
428 aa  88.6  5e-16  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011881  Achl_4621  extracellular solute-binding protein family 1  30.8 
 
 
413 aa  87.8  7e-16  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009523  RoseRS_3149  extracellular solute-binding protein  27.54 
 
 
427 aa  88.2  7e-16  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  27.16 
 
 
414 aa  87.8  9e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal 
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  25.75 
 
 
431 aa  84.3  0.00000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_011831  Cagg_0729  extracellular solute-binding protein family 1  29.59 
 
 
443 aa  83.6  0.00000000000002  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0000254304  normal 
 
 
-
 
NC_013526  Tter_2504  extracellular solute-binding protein family 1  25.34 
 
 
442 aa  82.8  0.00000000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12078  sugar-binding lipoprotein  26.59 
 
 
439 aa  80.9  0.0000000000001  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0137  extracellular solute-binding protein family 1  24.74 
 
 
453 aa  77  0.000000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  28.32 
 
 
425 aa  76.3  0.000000000002  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  25.23 
 
 
431 aa  76.3  0.000000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4688  extracellular solute-binding protein family 1  31.03 
 
 
418 aa  76.3  0.000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.733472 
 
 
-
 
NC_008699  Noca_4632  extracellular solute-binding protein  26.42 
 
 
419 aa  75.1  0.000000000005  Nocardioides sp. JS614  Bacteria  normal  0.448727  n/a   
 
 
-
 
NC_009523  RoseRS_3619  extracellular solute-binding protein  27.06 
 
 
488 aa  75.1  0.000000000005  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  28.15 
 
 
420 aa  74.7  0.000000000006  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_009767  Rcas_0516  extracellular solute-binding protein  26.86 
 
 
488 aa  74.7  0.000000000008  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0795  extracellular solute-binding protein family 1  23.06 
 
 
460 aa  73.9  0.00000000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.215252  n/a   
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  25.53 
 
 
445 aa  73.6  0.00000000002  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  22.22 
 
 
437 aa  72.4  0.00000000003  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2474  extracellular solute-binding protein family 1  25.19 
 
 
484 aa  72.4  0.00000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000108946  n/a   
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  22.43 
 
 
407 aa  71.6  0.00000000007  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2315  extracellular solute-binding protein family 1  24.21 
 
 
503 aa  70.5  0.0000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2513  extracellular solute-binding protein family 1  28.47 
 
 
441 aa  70.1  0.0000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  24.21 
 
 
436 aa  69.7  0.0000000002  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_013411  GYMC61_2731  extracellular solute-binding protein family 1  26.23 
 
 
454 aa  70.1  0.0000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2524  extracellular solute-binding protein family 1  25.35 
 
 
483 aa  70.1  0.0000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  decreased coverage  0.00000000331289  n/a   
 
 
-
 
NC_011368  Rleg2_5349  extracellular solute-binding protein family 1  26.05 
 
 
406 aa  70.1  0.0000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.535832 
 
 
-
 
NC_013521  Sked_27690  ABC-type sugar transport system, periplasmic component  32.91 
 
 
431 aa  69.7  0.0000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.340884 
 
 
-
 
NC_013526  Tter_2209  extracellular solute-binding protein family 1  24.58 
 
 
487 aa  68.9  0.0000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1634  sugar ABC transporter, sugar-binding protein  24.54 
 
 
416 aa  68.2  0.0000000007  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4697  extracellular solute-binding protein family 1  26.1 
 
 
442 aa  68.2  0.0000000007  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00367387  normal 
 
 
-
 
NC_003909  BCE_1899  extracellular solute-binding protein, putative  24.85 
 
 
416 aa  68.2  0.0000000008  Bacillus cereus ATCC 10987  Bacteria  normal  0.41529  n/a   
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  26.77 
 
 
441 aa  67.8  0.0000000008  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4083  extracellular solute-binding protein family 1  25.42 
 
 
417 aa  67.4  0.000000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5802  extracellular solute-binding protein family 1  25.73 
 
 
444 aa  67.4  0.000000001  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0809589 
 
 
-
 
NC_008243  Meso_4520  extracellular solute-binding protein  25.06 
 
 
415 aa  67.4  0.000000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2310  extracellular solute-binding protein family 1  21.78 
 
 
425 aa  67  0.000000001  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.00000000523246  n/a   
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  25 
 
 
504 aa  67.4  0.000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009616  Tmel_1820  extracellular solute-binding protein  23.72 
 
 
411 aa  67.4  0.000000001  Thermosipho melanesiensis BI429  Bacteria  normal  0.148067  n/a   
 
 
-
 
NC_013526  Tter_2218  extracellular solute-binding protein family 1  23.18 
 
 
479 aa  66.2  0.000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00910899  n/a   
 
 
-
 
NC_012669  Bcav_1698  extracellular solute-binding protein family 1  29.5 
 
 
447 aa  67  0.000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3459  extracellular solute-binding protein family 1  30.51 
 
 
458 aa  67  0.000000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.725469  normal 
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  23.94 
 
 
422 aa  65.9  0.000000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_3957  extracellular solute-binding protein family 1  25 
 
 
432 aa  66.2  0.000000003  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  25.4 
 
 
424 aa  65.9  0.000000003  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_012669  Bcav_0829  extracellular solute-binding protein family 1  24.73 
 
 
465 aa  65.5  0.000000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.308126 
 
 
-
 
NC_011368  Rleg2_5331  extracellular solute-binding protein family 1  28.28 
 
 
424 aa  65.1  0.000000005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  21.47 
 
 
437 aa  65.5  0.000000005  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_009523  RoseRS_2818  extracellular solute-binding protein  26.96 
 
 
488 aa  65.5  0.000000005  Roseiflexus sp. RS-1  Bacteria  normal  0.179577  normal 
 
 
-
 
NC_013525  Tter_0265  extracellular solute-binding protein family 1  22.63 
 
 
510 aa  65.1  0.000000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  23.59 
 
 
437 aa  65.1  0.000000006  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_013525  Tter_0183  extracellular solute-binding protein family 1  23.85 
 
 
429 aa  64.7  0.000000008  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013174  Jden_0513  extracellular solute-binding protein family 1  29.3 
 
 
447 aa  64.3  0.000000009  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.000000038068  hitchhiker  0.000703825 
 
 
-
 
NC_007492  Pfl01_2640  extracellular solute-binding protein  26.75 
 
 
436 aa  64.3  0.00000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.932575  normal 
 
 
-
 
NC_014213  Mesil_3226  Transcriptional regulator  24.87 
 
 
410 aa  63.9  0.00000001  Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  24.87 
 
 
410 aa  63.9  0.00000001  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0637  extracellular solute-binding protein  24.7 
 
 
425 aa  63.5  0.00000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0274  extracellular solute-binding protein  23.66 
 
 
439 aa  63.2  0.00000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.285114  normal 
 
 
-
 
NC_012854  Rleg_6528  extracellular solute-binding protein family 1  24.9 
 
 
415 aa  62.8  0.00000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0147922 
 
 
-
 
NC_013595  Sros_9091  ABC-type sugar transport system periplasmic component-like protein  23.92 
 
 
422 aa  62.4  0.00000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.306335  normal 
 
 
-
 
NC_011661  Dtur_0375  extracellular solute-binding protein family 1  24.16 
 
 
421 aa  62.8  0.00000003  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1866  extracellular solute-binding protein family 1  27.85 
 
 
434 aa  62.4  0.00000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_2546  extracellular solute-binding protein  26.59 
 
 
488 aa  62.8  0.00000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.39868  normal  0.139719 
 
 
-
 
NC_011661  Dtur_1732  extracellular solute-binding protein family 1  25.21 
 
 
415 aa  62  0.00000004  Dictyoglomus turgidum DSM 6724  Bacteria  unclonable  0.000000000368486  n/a   
 
 
-
 
NC_011369  Rleg2_1685  extracellular solute-binding protein family 1  28.66 
 
 
434 aa  62  0.00000005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1359  extracellular solute-binding protein  30.29 
 
 
458 aa  61.6  0.00000006  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0381  extracellular solute-binding protein family 1  25.63 
 
 
421 aa  61.6  0.00000007  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3430  extracellular solute-binding protein family 1  21.84 
 
 
415 aa  60.5  0.0000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3339  Maltose-binding periplasmic protein/domains- like protein  21.87 
 
 
431 aa  60.8  0.0000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.202326 
 
 
-
 
NC_009486  Tpet_0954  extracellular solute-binding protein  21.85 
 
 
411 aa  60.5  0.0000001  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1607  ABC transporter sugar-binding protein  22.31 
 
 
430 aa  60.1  0.0000002  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1655  extracellular solute-binding protein family 1  26.63 
 
 
425 aa  60.1  0.0000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.186521  normal  0.186231 
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  24.29 
 
 
431 aa  60.1  0.0000002  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_013159  Svir_11620  ABC-type sugar transport system, periplasmic component  22.1 
 
 
426 aa  60.1  0.0000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1886  extracellular solute-binding protein family 1  23.33 
 
 
435 aa  60.1  0.0000002  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.23125 
 
 
-
 
NC_010577  XfasM23_1550  extracellular solute-binding protein  22.31 
 
 
430 aa  60.1  0.0000002  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2647  extracellular solute-binding protein family 1  32.47 
 
 
446 aa  59.7  0.0000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.890591  n/a   
 
 
-
 
NC_009767  Rcas_3566  extracellular solute-binding protein  26.13 
 
 
454 aa  60.1  0.0000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.42847  normal  0.297516 
 
 
-
 
NC_010483  TRQ2_0970  extracellular solute-binding protein  21.85 
 
 
411 aa  60.1  0.0000002  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.000309876  n/a   
 
 
-
 
NC_012848  Rleg_5048  extracellular solute-binding protein family 1  27.64 
 
 
424 aa  59.3  0.0000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.133709  normal 
 
 
-
 
NC_013595  Sros_5738  ABC-type sugar transport system periplasmic component-like protein  26.65 
 
 
452 aa  59.7  0.0000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.599702  normal  0.0824986 
 
 
-
 
NC_014158  Tpau_1269  extracellular solute-binding protein family 1  28.57 
 
 
412 aa  58.9  0.0000004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0770  extracellular solute-binding protein family 1  24.21 
 
 
444 aa  58.9  0.0000004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0687  extracellular solute-binding protein  26.73 
 
 
407 aa  58.5  0.0000005  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.376534  normal  0.15795 
 
 
-
 
NC_011661  Dtur_0378  extracellular solute-binding protein family 1  23.49 
 
 
420 aa  58.5  0.0000005  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0405  ABC-type sugar transport system periplasmic component-like protein  20.31 
 
 
438 aa  58.2  0.0000006  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4159  extracellular solute-binding protein  22.79 
 
 
421 aa  58.5  0.0000006  Sinorhizobium medicae WSM419  Bacteria  normal  0.119299  normal  0.873951 
 
 
-
 
NC_013172  Bfae_07450  ABC-type sugar transport system, periplasmic component  23.21 
 
 
464 aa  58.5  0.0000006  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2703  extracellular solute-binding protein family 1  24.09 
 
 
450 aa  58.5  0.0000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000000263225  n/a   
 
 
-
 
NC_009921  Franean1_3944  extracellular solute-binding protein  27.73 
 
 
464 aa  58.2  0.0000006  Frankia sp. EAN1pec  Bacteria  normal  0.920276  normal  0.0416082 
 
 
-
 
NC_014165  Tbis_1090  extracellular solute-binding protein family 1  24.49 
 
 
436 aa  58.2  0.0000007  Thermobispora bispora DSM 43833  Bacteria  normal  0.667729  normal  0.0232634 
 
 
-
 
NC_014212  Mesil_2466  extracellular solute-binding protein family 1  25.51 
 
 
415 aa  57.8  0.0000008  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0930087 
 
 
-
 
NC_009939  Dgeo_3106  ABC transporter, substrate binding periplasmic component  25.57 
 
 
408 aa  57.8  0.0000008  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
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