13 homologs were found in PanDaTox collection
for query gene RoseRS_1426 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_1426  hypothetical protein  100 
 
 
431 aa  872    Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0176369 
 
 
-
 
NC_009767  Rcas_1694  hypothetical protein  88.6 
 
 
467 aa  788    Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.150498  hitchhiker  0.0000101572 
 
 
-
 
NC_009972  Haur_4843  hypothetical protein  33.94 
 
 
431 aa  202  9.999999999999999e-51  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.131363  n/a   
 
 
-
 
NC_013131  Caci_6399  glycoside hydrolase family 5  24.32 
 
 
415 aa  52.4  0.00002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.337804 
 
 
-
 
NC_011831  Cagg_0717  glycosyl hydrolase 53 protein  25 
 
 
534 aa  48.5  0.0002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2109  Carbohydrate-binding family 9  23.46 
 
 
1276 aa  47.4  0.0005  Thermobaculum terrenum ATCC BAA-798  Bacteria  decreased coverage  0.0000203571  n/a   
 
 
-
 
NC_013158  Huta_1344  hypothetical protein  25.57 
 
 
873 aa  46.6  0.001  Halorhabdus utahensis DSM 12940  Archaea  normal  0.173048  n/a   
 
 
-
 
NC_009767  Rcas_3938  hypothetical protein  23.58 
 
 
604 aa  45.4  0.002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2598  hypothetical protein  24.48 
 
 
340 aa  44.3  0.004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0262823  n/a   
 
 
-
 
NC_011831  Cagg_2394  hypothetical protein  25 
 
 
600 aa  44.3  0.005  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.010377  normal  0.174901 
 
 
-
 
NC_009664  Krad_1063  glycoside hydrolase family 5  24.26 
 
 
398 aa  43.9  0.006  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4282  Beta-xylosidase-like protein  24.23 
 
 
444 aa  43.5  0.008  Pseudomonas mendocina ymp  Bacteria  normal  0.296007  hitchhiker  0.00752766 
 
 
-
 
NC_009972  Haur_3384  hypothetical protein  26.92 
 
 
408 aa  43.5  0.008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
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