11 homologs were found in PanDaTox collection
for query gene RoseRS_0482 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_0482  hypothetical protein  100 
 
 
402 aa  800    Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0154  hypothetical protein  88.81 
 
 
401 aa  695    Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1917  hypothetical protein  60.15 
 
 
412 aa  479  1e-134  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00348625 
 
 
-
 
NC_009972  Haur_2792  hypothetical protein  39.01 
 
 
396 aa  287  2e-76  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1341  hypothetical protein  37.61 
 
 
967 aa  57.4  0.0000005  Rhodothermus marinus DSM 4252  Bacteria  normal  0.274019  n/a   
 
 
-
 
NC_009972  Haur_4245  N-acetylmuramoyl-L-alanine amidase  29.03 
 
 
1072 aa  54.3  0.000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.370967  n/a   
 
 
-
 
NC_009523  RoseRS_1610  N-acetylmuramoyl-L-alanine amidase  26.67 
 
 
964 aa  45.1  0.002  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B0761  minor extracellular protease VpR  27.78 
 
 
917 aa  45.1  0.002  Bacillus cereus G9842  Bacteria  hitchhiker  0.00881527  normal 
 
 
-
 
NC_009767  Rcas_3432  N-acetylmuramoyl-L-alanine amidase  25.99 
 
 
964 aa  44.7  0.003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0164906 
 
 
-
 
NC_009483  Gura_0068  fibronectin, type III domain-containing protein  28.16 
 
 
1695 aa  43.5  0.006  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20420  conserved repeat domain protein  33.72 
 
 
1248 aa  43.1  0.008  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
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