6 homologs were found in PanDaTox collection
for query gene RoseRS_0069 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_0069    100 
 
 
126 bp  250  7e-65  Roseiflexus sp. RS-1  Bacteria  normal  0.42382  normal  0.284005 
 
 
-
 
NC_009523  RoseRS_0277    95.95 
 
 
2238 bp  123  9.999999999999999e-27  Roseiflexus sp. RS-1  Bacteria  normal  unclonable  0.0000179844 
 
 
-
 
NC_009523  RoseRS_0278    95.95 
 
 
780 bp  123  9.999999999999999e-27  Roseiflexus sp. RS-1  Bacteria  normal  0.61153  unclonable  0.0000104282 
 
 
-
 
NC_009523  RoseRS_0436    95.95 
 
 
483 bp  123  9.999999999999999e-27  Roseiflexus sp. RS-1  Bacteria  normal  0.569945  normal  0.13862 
 
 
-
 
NC_009523  RoseRS_3134    87.72 
 
 
339 bp  115  3e-24  Roseiflexus sp. RS-1  Bacteria  normal  hitchhiker  0.00376941 
 
 
-
 
NC_009523  RoseRS_3937    87.72 
 
 
387 bp  115  3e-24  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
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