10 homologs were found in PanDaTox collection
for query gene Rmet_5959 on replicon NC_007971
Organism: Cupriavidus metallidurans CH34



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007971  Rmet_5959    100 
 
 		 522 bp  1035    Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.0200379 
 
 
-
 
NC_007337  Reut_D6456  phage integrase  81.82 
 
 		 1692 bp  139  9e-31  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_007974  Rmet_4514  Tyrosine-based site-specific recombinase  85.06 
 
 		 1680 bp  69.9  0.0000000007  Cupriavidus metallidurans CH34  Bacteria  normal  0.197712  normal  0.108767 
 
 
-
 
NC_010627  Bphy_7601    82.69 
 
 		 1065 bp  63.9  0.00000004  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007434  BURPS1710b_2103  phage integrase family protein  84.81 
 
 		 1680 bp  61.9  0.0000002  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_007950  Bpro_5529  phage integrase  87.5 
 
 		 1674 bp  56  0.00001  Polaromonas sp. JS666  Bacteria  normal  1  normal  0.95616 
 
 
-
 
NC_010515  Bcenmc03_4706  integrase family protein  82.95 
 
 		 1692 bp  56  0.00001  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_1337  phage integrase family protein  86.44 
 
 		 1698 bp  54  0.00004  Acidovorax sp. JS42  Bacteria  normal  0.515892  normal  0.256556 
 
 
-
 
NC_010682  Rpic_1740  integrase family protein  83.13 
 
 		 1680 bp  54  0.00004  Ralstonia pickettii 12J  Bacteria  normal  1  normal  0.407368 
 
 
-
 
NC_010682  Rpic_1746  integrase family protein  100 
 
 		 1329 bp  54  0.00004  Ralstonia pickettii 12J  Bacteria  normal  1  normal  0.526139 
 
 
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