4 homologs were found in PanDaTox collection
for query gene Rmet_5345 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007974  Rmet_5345  transcription regulator XpsR  100 
 
 
275 aa  566  1e-160  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00205606  normal 
 
 
-
 
NC_003296  RSp1003  transcription regulator XpsR transcription regulator protein  44.81 
 
 
306 aa  178  7e-44  Ralstonia solanacearum GMI1000  Bacteria  normal  decreased coverage  0.0016444 
 
 
-
 
NC_007954  Sden_1113  hypothetical protein  28.4 
 
 
250 aa  73.2  0.000000000004  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0814  hypothetical protein  26.94 
 
 
272 aa  42  0.01  Acidovorax sp. JS42  Bacteria  normal  0.933672  normal 
 
 
-
 
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