10 homologs were found in PanDaTox collection
for query gene Rmet_5029 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007974  Rmet_5029  putative lipase/acylhydrolase, GDSL-like protein  100 
 
 
444 aa  899    Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.000311483  normal  0.206495 
 
 
-
 
NC_011666  Msil_3062  hypothetical protein  28.72 
 
 
419 aa  99  1e-19  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_0932  lipolytic enzyme, G-D-S-L  30.81 
 
 
217 aa  82.8  0.00000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0932432  normal 
 
 
-
 
NC_013510  Tcur_0666  lipolytic protein G-D-S-L family  32.51 
 
 
262 aa  79  0.0000000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2886  lipolytic protein G-D-S-L family  31.58 
 
 
292 aa  55.1  0.000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008146  Mmcs_2685  lipolytic enzyme, G-D-S-L  30.33 
 
 
230 aa  49.3  0.0001  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2729  GDSL family lipase  30.33 
 
 
230 aa  49.3  0.0001  Mycobacterium sp. KMS  Bacteria  normal  normal  0.623881 
 
 
-
 
NC_009077  Mjls_2715  GDSL family lipase  30.33 
 
 
230 aa  48.9  0.0002  Mycobacterium sp. JLS  Bacteria  normal  normal  0.213163 
 
 
-
 
NC_009565  TBFG_10529  hypothetical protein  27.14 
 
 
231 aa  47.8  0.0004  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2599  lipolytic protein G-D-S-L family  27.36 
 
 
227 aa  43.5  0.007  Tsukamurella paurometabola DSM 20162  Bacteria  decreased coverage  0.000683543  n/a   
 
 
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