87 homologs were found in PanDaTox collection
for query gene Rmar_1544 on replicon NC_013501
Organism: Rhodothermus marinus DSM 4252



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013501  Rmar_1544  phenylacetate-CoA oxygenase, PaaH subunit  100 
 
 		 97 aa  202  1e-51  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_1745  phenylacetate-CoA oxygenase, PaaH subunit  58.51 
 
 		 94 aa  120  5e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.670947 
 
 
-
 
NC_013739  Cwoe_2199  phenylacetate-CoA oxygenase, PaaH subunit  52.58 
 
 		 97 aa  107  5e-23  Conexibacter woesei DSM 14684  Bacteria  normal  0.586204  normal  1 
 
 
-
 
NC_007925  RPC_0690  phenylacetate-CoA oxygenase subunit PaaB  53.76 
 
 		 95 aa  107  7.000000000000001e-23  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_3158  phenylacetate-CoA oxygenase subunit PaaB  56.82 
 
 		 93 aa  107  8.000000000000001e-23  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_2490  phenylacetate-CoA oxygenase, PaaH subunit  55.91 
 
 		 111 aa  105  2e-22  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00000503396  normal  0.0134481 
 
 
-
 
NC_008578  Acel_1442  phenylacetate-CoA oxygenase subunit PaaB  56.82 
 
 		 97 aa  105  2e-22  Acidothermus cellulolyticus 11B  Bacteria  normal  0.968932  normal  1 
 
 
-
 
NC_007958  RPD_1825  phenylacetate-CoA oxygenase subunit PaaB  54.55 
 
 		 95 aa  105  2e-22  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.108595  normal  1 
 
 
-
 
NC_012791  Vapar_1234  phenylacetate-CoA oxygenase subunit PaaB  51.04 
 
 		 98 aa  105  2e-22  Variovorax paradoxus S110  Bacteria  normal  0.849517  n/a   
 
 
-
 
NC_011004  Rpal_4288  phenylacetate-CoA oxygenase subunit PaaB  52.81 
 
 		 95 aa  104  4e-22  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0448206  n/a   
 
 
-
 
NC_007778  RPB_3640  phenylacetate-CoA oxygenase subunit PaaB  54.55 
 
 		 95 aa  104  4e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.492282 
 
 
-
 
NC_009485  BBta_2866  phenylacetate-CoA oxygenase subunit PaaB  54.55 
 
 		 95 aa  104  5e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0886205  normal  0.281971 
 
 
-
 
NC_009720  Xaut_0897  phenylacetate-CoA oxygenase subunit PaaB  53.41 
 
 		 95 aa  103  8e-22  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_4471  phenylacetate-CoA oxygenase subunit PaaB  55.68 
 
 		 106 aa  103  8e-22  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_0811  phenylacetate-CoA oxygenase subunit PaaB  52.13 
 
 		 101 aa  103  8e-22  Delftia acidovorans SPH-1  Bacteria  normal  0.323223  normal  1 
 
 
-
 
NC_008825  Mpe_A0988  phenylacetate-CoA oxygenase subunit PaaB  52.27 
 
 		 96 aa  103  9e-22  Methylibium petroleiphilum PM1  Bacteria  normal  0.194328  normal  1 
 
 
-
 
NC_009484  Acry_2609  phenylacetate-CoA oxygenase subunit PaaB  54.55 
 
 		 95 aa  103  1e-21  Acidiphilium cryptum JF-5  Bacteria  normal  0.588485  n/a   
 
 
-
 
NC_008786  Veis_3946  phenylacetate-CoA oxygenase subunit PaaB  52.27 
 
 		 140 aa  102  2e-21  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.311434  normal  0.35019 
 
 
-
 
NC_007973  Rmet_3370  phenylacetate-CoA oxygenase subunit PaaB  53.41 
 
 		 95 aa  101  3e-21  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007348  Reut_B3736  phenylacetate-CoA oxygenase subunit PaaB  51.14 
 
 		 93 aa  100  5e-21  Ralstonia eutropha JMP134  Bacteria  normal  0.300256  n/a   
 
 
-
 
NC_009380  Strop_4072  phenylacetate-CoA oxygenase subunit PaaB  54.55 
 
 		 106 aa  100  6e-21  Salinispora tropica CNB-440  Bacteria  normal  0.733773  normal  0.10942 
 
 
-
 
NC_009832  Spro_3073  phenylacetate-CoA oxygenase subunit PaaB  48.86 
 
 		 96 aa  100  6e-21  Serratia proteamaculans 568  Bacteria  normal  1  normal  0.147371 
 
 
-
 
NC_013947  Snas_1239  phenylacetate-CoA oxygenase PaaH subunit  54.55 
 
 		 93 aa  100  6e-21  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_1505  phenylacetate-CoA oxygenase subunit PaaB  54.55 
 
 		 98 aa  100  9e-21  Thauera sp. MZ1T  Bacteria  normal  0.329955  n/a   
 
 
-
 
NC_010524  Lcho_3573  phenylacetate-CoA oxygenase subunit PaaB  47.42 
 
 		 100 aa  100  9e-21  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.338904 
 
 
-
 
NC_013169  Ksed_09300  phenylacetate-CoA oxygenase, PaaH subunit  52.69 
 
 		 95 aa  99.8  1e-20  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007964  Nham_0929  phenylacetate-CoA oxygenase subunit PaaB  56.1 
 
 		 94 aa  99.8  1e-20  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_010678  Rpic_4566  phenylacetate-CoA oxygenase subunit PaaB  52.27 
 
 		 95 aa  99.4  2e-20  Ralstonia pickettii 12J  Bacteria  normal  0.229996  normal  0.565711 
 
 
-
 
NC_012857  Rpic12D_3494  phenylacetate-CoA oxygenase subunit PaaB  52.27 
 
 		 95 aa  99.4  2e-20  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.144039 
 
 
-
 
NC_007651  BTH_I3098  phenylacetate-CoA oxygenase subunit PaaB  50 
 
 		 113 aa  98.6  2e-20  Burkholderia thailandensis E264  Bacteria  hitchhiker  0.00422543  n/a   
 
 
-
 
NC_009511  Swit_0754  phenylacetate-CoA oxygenase subunit PaaB  52.13 
 
 		 94 aa  99  2e-20  Sphingomonas wittichii RW1  Bacteria  normal  0.933825  normal  0.424699 
 
 
-
 
NC_009076  BURPS1106A_3837  phenylacetate-CoA oxygenase subunit PaaB  50 
 
 		 113 aa  99  2e-20  Burkholderia pseudomallei 1106a  Bacteria  normal  0.317768  n/a   
 
 
-
 
NC_010622  Bphy_2858  phenylacetate-CoA oxygenase subunit PaaB  51.14 
 
 		 94 aa  98.2  3e-20  Burkholderia phymatum STM815  Bacteria  normal  0.721  hitchhiker  0.00361704 
 
 
-
 
NC_010551  BamMC406_0257  phenylacetate-CoA oxygenase subunit PaaB  51.14 
 
 		 94 aa  98.6  3e-20  Burkholderia ambifaria MC40-6  Bacteria  hitchhiker  0.00068602  normal  0.0451775 
 
 
-
 
NC_008709  Ping_0651  phenylacetate-CoA oxygenase subunit PaaB  48.86 
 
 		 95 aa  98.6  3e-20  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009074  BURPS668_3776  phenylacetate-CoA oxygenase subunit PaaB  50 
 
 		 113 aa  98.2  3e-20  Burkholderia pseudomallei 668  Bacteria  hitchhiker  0.000994087  n/a   
 
 
-
 
NC_014230  CA2559_05330  Phenylacetic acid degradation B  51.14 
 
 		 96 aa  98.2  3e-20  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.0866504  n/a   
 
 
-
 
NC_007298  Daro_0378  phenylacetate-CoA oxygenase subunit PaaB  51.76 
 
 		 97 aa  98.2  3e-20  Dechloromonas aromatica RCB  Bacteria  normal  0.0130596  hitchhiker  0.00116288 
 
 
-
 
NC_008785  BMASAVP1_A0011  phenylacetate-CoA oxygenase subunit PaaB  50 
 
 		 113 aa  98.2  3e-20  Burkholderia mallei SAVP1  Bacteria  hitchhiker  0.000021487  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3112  phenylacetate-CoA oxygenase subunit PaaB  50 
 
 		 113 aa  98.2  3e-20  Burkholderia mallei SAVP1  Bacteria  hitchhiker  0.000000659242  n/a   
 
 
-
 
NC_008836  BMA10229_A1983  phenylacetate-CoA oxygenase subunit PaaB  50 
 
 		 113 aa  98.2  3e-20  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0181428  n/a   
 
 
-
 
NC_009080  BMA10247_3536  phenylacetate-CoA oxygenase subunit PaaB  50 
 
 		 113 aa  98.2  3e-20  Burkholderia mallei NCTC 10247  Bacteria  normal  0.10948  n/a   
 
 
-
 
NC_008390  Bamb_0248  phenylacetate-CoA oxygenase subunit PaaB  51.14 
 
 		 94 aa  97.8  4e-20  Burkholderia ambifaria AMMD  Bacteria  normal  0.0206057  n/a   
 
 
-
 
NC_006348  BMA2574  phenylacetate-CoA oxygenase subunit PaaB  50 
 
 		 94 aa  98.2  4e-20  Burkholderia mallei ATCC 23344  Bacteria  normal  0.229514  n/a   
 
 
-
 
NC_003296  RSp0605  phenylacetate-CoA oxygenase subunit PaaB  51.14 
 
 		 95 aa  97.8  4e-20  Ralstonia solanacearum GMI1000  Bacteria  normal  0.62755  normal  1 
 
 
-
 
NC_007510  Bcep18194_A3428  phenylacetate-CoA oxygenase subunit PaaB  51.14 
 
 		 94 aa  97.8  5e-20  Burkholderia sp. 383  Bacteria  hitchhiker  0.0000130339  normal  1 
 
 
-
 
NC_008542  Bcen2424_0329  phenylacetate-CoA oxygenase subunit PaaB  51.14 
 
 		 94 aa  97.4  6e-20  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0933291  n/a   
 
 
-
 
NC_008060  Bcen_2777  phenylacetate-CoA oxygenase subunit PaaB  51.14 
 
 		 94 aa  97.4  6e-20  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0101093  n/a   
 
 
-
 
NC_007347  Reut_A3207  phenylacetate-CoA oxygenase subunit PaaB  52.27 
 
 		 95 aa  97.1  7e-20  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_010084  Bmul_0231  phenylacetate-CoA oxygenase subunit PaaB  51.14 
 
 		 94 aa  97.1  7e-20  Burkholderia multivorans ATCC 17616  Bacteria  hitchhiker  0.0000157686  hitchhiker  0.00116795 
 
 
-
 
NC_009800  EcHS_A1476  phenylacetate-CoA oxygenase subunit PaaB  48.86 
 
 		 95 aa  97.1  8e-20  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_010681  Bphyt_3663  phenylacetate-CoA oxygenase subunit PaaB  52.27 
 
 		 94 aa  97.1  8e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0953429  hitchhiker  0.000000240833 
 
 
-
 
NC_010468  EcolC_2266  phenylacetate-CoA oxygenase subunit PaaB  48.86 
 
 		 95 aa  97.1  8e-20  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007951  Bxe_A0294  phenylacetate-CoA oxygenase subunit PaaB  52.27 
 
 		 94 aa  97.1  8e-20  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009801  EcE24377A_1574  phenylacetate-CoA oxygenase subunit PaaB  48.86 
 
 		 95 aa  96.7  9e-20  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
CP001637  EcDH1_2256  phenylacetate-CoA oxygenase, PaaH subunit  48.86 
 
 		 95 aa  96.7  9e-20  Escherichia coli DH1  Bacteria  normal  0.735029  n/a   
 
 
-
 
NC_010508  Bcenmc03_0309  phenylacetate-CoA oxygenase subunit PaaB  50 
 
 		 94 aa  96.7  1e-19  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.000344095  hitchhiker  0.00245568 
 
 
-
 
NC_008688  Pden_4809  phenylacetate-CoA oxygenase subunit PaaB  50 
 
 		 94 aa  96.3  1e-19  Paracoccus denitrificans PD1222  Bacteria  normal  0.737806  normal  0.497518 
 
 
-
 
NC_011894  Mnod_3355  phenylacetate-CoA oxygenase subunit PaaB  48.35 
 
 		 94 aa  96.3  1e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.610468  n/a   
 
 
-
 
NC_007434  BURPS1710b_0008  phenylacetic acid degradation protein PaaB  50 
 
 		 314 aa  95.9  2e-19  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0391689  n/a   
 
 
-
 
NC_008043  TM1040_3725  phenylacetate-CoA oxygenase subunit PaaB  47.25 
 
 		 94 aa  95.1  3e-19  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.518454 
 
 
-
 
NC_013093  Amir_6691  phenylacetate-CoA oxygenase, PaaH subunit  51.14 
 
 		 96 aa  95.1  3e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_3094  phenylacetate-CoA oxygenase subunit PaaB  50.59 
 
 		 93 aa  94.7  4e-19  Marinomonas sp. MWYL1  Bacteria  normal  0.128136  hitchhiker  0.00067057 
 
 
-
 
NC_009956  Dshi_3819  phenylacetate-CoA oxygenase subunit PaaB  49.41 
 
 		 110 aa  93.2  1e-18  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.375319  normal  0.358605 
 
 
-
 
NC_011886  Achl_2963  phenylacetate-CoA oxygenase subunit PaaB  52.27 
 
 		 157 aa  92.8  1e-18  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_010506  Swoo_0220  phenylacetate-CoA oxygenase subunit PaaB  44.32 
 
 		 100 aa  92.4  2e-18  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.0142042 
 
 
-
 
NC_009620  Smed_4148  phenylacetate-CoA oxygenase subunit PaaB  50.59 
 
 		 94 aa  92  2e-18  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.733819 
 
 
-
 
NC_011894  Mnod_7198  phenylacetate-CoA oxygenase subunit PaaB  53.76 
 
 		 95 aa  89.7  1e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.409122  n/a   
 
 
-
 
NC_013159  Svir_26520  phenylacetate-CoA oxygenase, PaaH subunit  51.76 
 
 		 94 aa  89.7  1e-17  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.217655  normal  0.197294 
 
 
-
 
NC_010501  PputW619_2632  phenylacetate-CoA oxygenase subunit PaaB  46.59 
 
 		 93 aa  89.4  2e-17  Pseudomonas putida W619  Bacteria  normal  0.135351  normal  0.0742322 
 
 
-
 
NC_002947  PP_3277  phenylacetate-CoA oxygenase subunit PaaB  46.59 
 
 		 93 aa  89.4  2e-17  Pseudomonas putida KT2440  Bacteria  normal  0.950768  normal  1 
 
 
-
 
NC_008541  Arth_3217  phenylacetate-CoA oxygenase subunit PaaB  48.86 
 
 		 100 aa  88.6  2e-17  Arthrobacter sp. FB24  Bacteria  normal  0.0423434  n/a   
 
 
-
 
NC_009512  Pput_2482  phenylacetate-CoA oxygenase subunit PaaB  46.59 
 
 		 93 aa  89.4  2e-17  Pseudomonas putida F1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_2619  phenylacetate-CoA oxygenase subunit PaaB  46.59 
 
 		 93 aa  89.4  2e-17  Pseudomonas putida GB-1  Bacteria  normal  0.613188  normal  0.3997 
 
 
-
 
NC_007802  Jann_0654  phenylacetate-CoA oxygenase subunit PaaB  55.29 
 
 		 96 aa  88.6  3e-17  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012803  Mlut_20160  phenylacetate-CoA oxygenase subunit PaaB  46.59 
 
 		 100 aa  86.7  1e-16  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_1906  phenylacetate-CoA oxygenase, PaaH subunit  47.73 
 
 		 123 aa  83.2  0.000000000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_2480  phenylacetate-CoA oxygenase, PaaH subunit  46.59 
 
 		 105 aa  81.6  0.000000000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_0788  phenylacetic acid degradation B  38.82 
 
 		 122 aa  58.2  0.00000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.12801 
 
 
-
 
NC_013743  Htur_2887  phenylacetic acid degradation B  39.02 
 
 		 105 aa  56.6  0.0000001  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013922  Nmag_1026  phenylacetic acid degradation B  39.51 
 
 		 105 aa  55.5  0.0000003  Natrialba magadii ATCC 43099  Archaea  normal  0.22394  n/a   
 
 
-
 
NC_014212  Mesil_3044  phenylacetic acid degradation B  44.26 
 
 		 185 aa  51.2  0.000005  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013946  Mrub_2411  phenylacetic acid degradation B  45.9 
 
 		 187 aa  49.3  0.00002  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_0808  phenylacetic acid degradation B  37.66 
 
 		 125 aa  47.8  0.00005  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.316826  n/a   
 
 
-
 
NC_013411  GYMC61_2868  phenylacetate-CoA oxygenase, PaaH subunit  36.9 
 
 		 117 aa  47.4  0.00006  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008025  Dgeo_1917  phenylacetic acid degradation B  44.64 
 
 		 192 aa  43.9  0.0007  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.651042  normal  0.140644 
 
 
-
 
NC_013743  Htur_1727  hypothetical protein  37.88 
 
 		 126 aa  40.8  0.006  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
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