106 homologs were found in PanDaTox collection
for query gene Rleg_6646 on replicon NC_012858
Organism: Rhizobium leguminosarum bv. trifolii WSM1325



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012858  Rleg_6646  ANTAR domain protein with unknown sensor  100 
 
 
207 aa  416  9.999999999999999e-116  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.274077  normal  0.0846161 
 
 
-
 
NC_011366  Rleg2_5693  ANTAR domain protein with unknown sensor  96.6 
 
 
207 aa  405  1.0000000000000001e-112  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0468503  normal 
 
 
-
 
NC_010505  Mrad2831_4420  response regulator receiver/ANTAR domain-containing protein  58.13 
 
 
208 aa  229  3e-59  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2995  hypothetical protein  52.79 
 
 
213 aa  199  3e-50  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C1304  response regulator receiver/ANTAR domain-containing protein  41.92 
 
 
206 aa  156  2e-37  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_5906  response regulator receiver/ANTAR domain-containing protein  41 
 
 
206 aa  152  4e-36  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.311364  normal  0.0816062 
 
 
-
 
NC_010681  Bphyt_0050  response regulator receiver and ANTAR domain protein  43.01 
 
 
200 aa  144  6e-34  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0802  ANTAR domain protein with unknown sensor  34.97 
 
 
212 aa  132  3.9999999999999996e-30  Dickeya dadantii Ech703  Bacteria  normal  0.0673655  n/a   
 
 
-
 
NC_010002  Daci_3637  response regulator receiver/ANTAR domain-containing protein  33.84 
 
 
229 aa  126  3e-28  Delftia acidovorans SPH-1  Bacteria  normal  0.0573839  normal  0.0644959 
 
 
-
 
NC_007005  Psyr_2207  ANTAR  36.51 
 
 
210 aa  123  2e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2420  transcription antitermination protein, putative  36.51 
 
 
210 aa  122  3e-27  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4901  response regulator receiver/ANTAR domain-containing protein  34.72 
 
 
216 aa  122  5e-27  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.138975 
 
 
-
 
NC_007511  Bcep18194_B1847  response regulator receiver/ANTAR domain-containing protein  32.98 
 
 
203 aa  115  3.9999999999999997e-25  Burkholderia sp. 383  Bacteria  normal  0.871675  normal  0.25422 
 
 
-
 
NC_010676  Bphyt_5752  response regulator receiver and ANTAR domain protein  33.16 
 
 
216 aa  107  1e-22  Burkholderia phytofirmans PsJN  Bacteria  normal  0.320255  normal  0.798388 
 
 
-
 
NC_007947  Mfla_0461  response regulator receiver/ANTAR domain-containing protein  32.26 
 
 
208 aa  105  4e-22  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.537058 
 
 
-
 
NC_009439  Pmen_4597  response regulator receiver/ANTAR domain-containing protein  33.85 
 
 
199 aa  103  1e-21  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_20590  aliphatic amidase regulator  32.45 
 
 
196 aa  97.4  1e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.00237487  normal  0.77718 
 
 
-
 
NC_009656  PSPA7_1767  aliphatic amidase regulator  33.33 
 
 
196 aa  95.5  4e-19  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2144  response regulator receiver/ANTAR domain-containing protein  35.14 
 
 
194 aa  90.9  1e-17  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1952  putative aliphatic amidase regulator (AmiR)  39.17 
 
 
148 aa  78.6  0.00000000000007  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4296  ANTAR  27.78 
 
 
194 aa  74.3  0.000000000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0466063 
 
 
-
 
NC_012858  Rleg_6673  ANTAR domain protein with unknown sensor  28.11 
 
 
193 aa  72.4  0.000000000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0170316  normal  0.327107 
 
 
-
 
NC_009253  Dred_2808  response regulator receiver/ANTAR domain-containing protein  35.14 
 
 
220 aa  61.2  0.00000001  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.00041222  n/a   
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  29.69 
 
 
196 aa  60.8  0.00000001  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3323  response regulator receiver/ANTAR domain-containing protein  25.98 
 
 
213 aa  59.7  0.00000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.168384  normal 
 
 
-
 
NC_009429  Rsph17025_3278  ABC-type branched-chain amino acid transport systems periplasmic component-like protein  27.57 
 
 
199 aa  59.3  0.00000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.225286  normal  0.994762 
 
 
-
 
NC_011004  Rpal_2662  response regulator receiver and ANTAR domain protein  27.69 
 
 
221 aa  58.2  0.00000009  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.151243  n/a   
 
 
-
 
NC_007494  RSP_3259  transcription antitermination protein  26.23 
 
 
199 aa  57  0.0000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1295  response regulator receiver/ANTAR domain-containing protein  46.67 
 
 
208 aa  57.4  0.0000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.153579  normal  0.0128304 
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  28.65 
 
 
196 aa  57  0.0000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3991  response regulator receiver/ANTAR domain-containing protein  26.23 
 
 
199 aa  55.8  0.0000004  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2177  response regulator receiver/ANTAR domain-containing protein  27.7 
 
 
190 aa  55.1  0.0000007  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_1694  response regulator receiver/ANTAR domain-containing protein  32.61 
 
 
201 aa  54.3  0.000001  Arthrobacter sp. FB24  Bacteria  normal  0.136848  n/a   
 
 
-
 
NC_009636  Smed_1754  response regulator receiver/ANTAR domain-containing protein  23.3 
 
 
204 aa  53.9  0.000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.299806  normal  0.0795607 
 
 
-
 
NC_011886  Achl_1689  response regulator receiver and ANTAR domain protein  32.61 
 
 
201 aa  53.9  0.000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000385738 
 
 
-
 
NC_010424  Daud_2028  response regulator receiver/ANTAR domain-containing protein  34.34 
 
 
192 aa  52.8  0.000003  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000049817  n/a   
 
 
-
 
NC_010676  Bphyt_5673  response regulator receiver and ANTAR domain protein  28.27 
 
 
191 aa  53.1  0.000003  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.598594 
 
 
-
 
NC_010725  Mpop_5014  response regulator receiver and ANTAR domain protein  26.74 
 
 
195 aa  52.4  0.000004  Methylobacterium populi BJ001  Bacteria  normal  normal  0.757534 
 
 
-
 
NC_013216  Dtox_3761  response regulator receiver and ANTAR domain protein  30.85 
 
 
194 aa  52.8  0.000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000015775  normal 
 
 
-
 
NC_010172  Mext_4498  ANTAR domain-containing protein  28.19 
 
 
195 aa  52.4  0.000005  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_1632  response regulator receiver and ANTAR domain protein  27.1 
 
 
207 aa  52.4  0.000005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0623893 
 
 
-
 
NC_009720  Xaut_2506  response regulator receiver/ANTAR domain-containing protein  28.38 
 
 
221 aa  51.6  0.000007  Xanthobacter autotrophicus Py2  Bacteria  normal  0.187461  normal 
 
 
-
 
NC_011757  Mchl_4961  response regulator receiver and ANTAR domain protein  28.19 
 
 
195 aa  51.6  0.000008  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.044252 
 
 
-
 
NC_007925  RPC_3021  response regulator receiver/ANTAR domain-containing protein  26.02 
 
 
221 aa  50.8  0.00001  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.646198 
 
 
-
 
NC_008578  Acel_1081  response regulator receiver/ANTAR domain-containing protein  25 
 
 
247 aa  51.2  0.00001  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4528  response regulator receiver/ANTAR domain-containing protein  26.79 
 
 
196 aa  50.8  0.00001  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2302  response regulator receiver/ANTAR domain-containing protein  28.19 
 
 
195 aa  51.2  0.00001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.874561 
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  27.03 
 
 
197 aa  50.8  0.00001  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_007952  Bxe_B1048  response regulator receiver/ANTAR domain-containing protein  27.75 
 
 
191 aa  50.1  0.00002  Burkholderia xenovorans LB400  Bacteria  normal  0.192908  normal  0.77765 
 
 
-
 
NC_010814  Glov_0419  response regulator receiver and ANTAR domain protein  34.88 
 
 
182 aa  50.1  0.00002  Geobacter lovleyi SZ  Bacteria  normal  0.069314  n/a   
 
 
-
 
NC_011369  Rleg2_1455  response regulator receiver and ANTAR domain protein  26.45 
 
 
195 aa  50.4  0.00002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.770993 
 
 
-
 
NC_013757  Gobs_3208  response regulator receiver and ANTAR domain protein  29.35 
 
 
200 aa  48.9  0.00006  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  25.79 
 
 
194 aa  48.5  0.00006  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_009485  BBta_3201  hypothetical protein  26.53 
 
 
221 aa  48.5  0.00007  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_2959  response regulator receiver/ANTAR domain-containing protein  25.64 
 
 
192 aa  48.5  0.00007  Caulobacter sp. K31  Bacteria  normal  normal  0.793007 
 
 
-
 
NC_002939  GSU2822  response regulator  32.11 
 
 
191 aa  48.1  0.00008  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3445  response regulator receiver/ANTAR domain-containing protein  27.66 
 
 
191 aa  48.1  0.00008  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0660  response regulator receiver/ANTAR domain-containing protein  30.28 
 
 
202 aa  47.8  0.0001  Geobacter metallireducens GS-15  Bacteria  normal  0.132289  normal  0.0166929 
 
 
-
 
NC_011988  Avi_5900  two component response regulator  28.39 
 
 
195 aa  47.8  0.0001  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5428  response regulator receiver and ANTAR domain protein  31.71 
 
 
194 aa  46.6  0.0002  Conexibacter woesei DSM 14684  Bacteria  normal  0.348018  normal 
 
 
-
 
NC_009485  BBta_4139  response regulator receiver/ANTAR domain-containing protein  26.85 
 
 
196 aa  47.4  0.0002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.214536 
 
 
-
 
NC_007520  Tcr_1151  response regulator receiver/ANTAR domain-containing protein  25 
 
 
195 aa  46.6  0.0003  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1146  response regulator receiver/ANTAR domain-containing protein  27.27 
 
 
188 aa  46.2  0.0003  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_009972  Haur_4203  response regulator receiver/ANTAR domain-containing protein  25.17 
 
 
195 aa  46.2  0.0003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.793788  n/a   
 
 
-
 
NC_013385  Adeg_1890  response regulator receiver and ANTAR domain protein  27.93 
 
 
197 aa  46.2  0.0003  Ammonifex degensii KC4  Bacteria  normal  0.0366782  n/a   
 
 
-
 
NC_007963  Csal_1132  response regulator receiver/ANTAR domain-containing protein  23.68 
 
 
194 aa  46.2  0.0004  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.169793  n/a   
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  34.07 
 
 
191 aa  45.8  0.0004  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_012560  Avin_23450  response regulator NasT  32.29 
 
 
192 aa  45.8  0.0005  Azotobacter vinelandii DJ  Bacteria  normal  0.212044  n/a   
 
 
-
 
NC_008146  Mmcs_3021  response regulator receiver/ANTAR domain-containing protein  30 
 
 
210 aa  45.4  0.0006  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3067  response regulator receiver/ANTAR domain-containing protein  30 
 
 
210 aa  45.4  0.0006  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2581  response regulator receiver/ANTAR domain-containing protein  32.29 
 
 
192 aa  45.4  0.0006  Pseudomonas mendocina ymp  Bacteria  normal  0.298585  hitchhiker  0.00648362 
 
 
-
 
NC_009664  Krad_2958  response regulator receiver and ANTAR domain protein  27.66 
 
 
229 aa  45.4  0.0006  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.799557  normal  0.502809 
 
 
-
 
NC_010511  M446_3741  response regulator receiver/ANTAR domain-containing protein  26.85 
 
 
202 aa  45.4  0.0007  Methylobacterium sp. 4-46  Bacteria  normal  0.755024  normal  0.109153 
 
 
-
 
NC_011004  Rpal_4227  response regulator receiver and ANTAR domain protein  29.31 
 
 
194 aa  45.1  0.0007  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0711042  n/a   
 
 
-
 
NC_009565  TBFG_11642  two component system transcriptional regulator  25.38 
 
 
205 aa  45.1  0.0008  Mycobacterium tuberculosis F11  Bacteria  normal  0.0378541  normal  0.634495 
 
 
-
 
NC_013530  Xcel_1506  response regulator receiver and ANTAR domain protein  25 
 
 
220 aa  45.1  0.0008  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_14950  response regulator with putative antiterminator output domain  25 
 
 
215 aa  44.7  0.0009  Brachybacterium faecium DSM 4810  Bacteria  normal  0.117628  n/a   
 
 
-
 
NC_007963  Csal_0209  response regulator receiver/ANTAR domain-containing protein  23.43 
 
 
195 aa  44.7  0.001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5028  response regulator receiver and ANTAR domain protein  24.57 
 
 
198 aa  44.3  0.001  Conexibacter woesei DSM 14684  Bacteria  normal  0.181706  normal  0.0113639 
 
 
-
 
NC_011894  Mnod_2871  response regulator receiver and ANTAR domain protein  26.17 
 
 
204 aa  44.7  0.001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.372726  n/a   
 
 
-
 
NC_014210  Ndas_3159  response regulator receiver and ANTAR domain protein  25.56 
 
 
212 aa  44.7  0.001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_0084  response regulator receiver and ANTAR domain protein  35.29 
 
 
242 aa  44.7  0.001  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.682854  n/a   
 
 
-
 
NC_007498  Pcar_2091  response regulator  31.76 
 
 
187 aa  43.5  0.002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_2840  response regulator receiver/ANTAR domain-containing protein  28.12 
 
 
213 aa  43.9  0.002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0401204  normal 
 
 
-
 
NC_008786  Veis_2589  Fis family transcriptional regulator  29.9 
 
 
208 aa  43.5  0.002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0488842 
 
 
-
 
NC_008825  Mpe_A2314  response regulator  25.75 
 
 
426 aa  43.9  0.002  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3036  response regulator receiver/ANTAR domain-containing protein  29 
 
 
210 aa  43.5  0.002  Mycobacterium sp. JLS  Bacteria  normal  0.222389  normal  0.216241 
 
 
-
 
NC_009523  RoseRS_4102  response regulator receiver/ANTAR domain-containing protein  32.61 
 
 
194 aa  43.9  0.002  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3658  response regulator receiver/ANTAR domain-containing protein  32.61 
 
 
194 aa  43.5  0.002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.568485 
 
 
-
 
NC_010718  Nther_0963  response regulator receiver and ANTAR domain protein  24.72 
 
 
191 aa  43.5  0.002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000231614  normal 
 
 
-
 
NC_013131  Caci_5687  response regulator receiver and ANTAR domain protein  21.09 
 
 
210 aa  43.5  0.002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1211  response regulator receiver/ANTAR domain-containing protein  27.59 
 
 
194 aa  43.1  0.003  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_41490  hypothetical protein  31.91 
 
 
192 aa  42.7  0.003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_2394  response regulator receiver and ANTAR domain protein  23.53 
 
 
218 aa  43.1  0.003  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00108275  hitchhiker  0.000509226 
 
 
-
 
NC_013457  VEA_001606  putative two-component response regulatory protein  32.1 
 
 
193 aa  43.1  0.003  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3575  response regulator receiver/ANTAR domain-containing protein  28.12 
 
 
229 aa  42.7  0.004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.10936  normal  0.0183031 
 
 
-
 
NC_009656  PSPA7_3519  hypothetical protein  31.91 
 
 
192 aa  42.7  0.004  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4357  response regulator receiver/ANTAR domain-containing protein  32.26 
 
 
198 aa  42.7  0.004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.480943  n/a   
 
 
-
 
NC_007298  Daro_0829  response regulator receiver:ANTAR  31.82 
 
 
191 aa  42.4  0.005  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.018256 
 
 
-
 
NC_007492  Pfl01_1784  response regulator receiver  31.46 
 
 
191 aa  42.4  0.005  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
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