More than 300 homologs were found in PanDaTox collection
for query gene Rleg_5213 on replicon NC_012848
Organism: Rhizobium leguminosarum bv. trifolii WSM1325



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011368  Rleg2_5476  extracellular solute-binding protein family 1  97.35 
 
 
415 aa  830    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.487316 
 
 
-
 
NC_012848  Rleg_5213  extracellular solute-binding protein family 1  100 
 
 
415 aa  847    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.506772 
 
 
-
 
NC_013521  Sked_02930  carbohydrate-binding protein  61.07 
 
 
426 aa  521  1e-146  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0748  sugar ABC transporter, periplasmic sugar-binding protein, putative  25.48 
 
 
411 aa  118  1.9999999999999998e-25  Brucella suis 1330  Bacteria  normal  0.537127  n/a   
 
 
-
 
NC_009668  Oant_3895  extracellular solute-binding protein  25.76 
 
 
411 aa  118  1.9999999999999998e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0698  putative sugar ABC transporter, periplasmic sugar-binding protein  27.42 
 
 
366 aa  114  3e-24  Brucella ovis ATCC 25840  Bacteria  normal  0.436581  n/a   
 
 
-
 
NC_009616  Tmel_0690  extracellular solute-binding protein  28.05 
 
 
402 aa  112  9e-24  Thermosipho melanesiensis BI429  Bacteria  normal  0.678935  n/a   
 
 
-
 
NC_013159  Svir_16660  ABC-type sugar transport system, periplasmic component  26.42 
 
 
406 aa  100  4e-20  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.613471  normal 
 
 
-
 
NC_011369  Rleg2_3121  extracellular solute-binding protein family 1  25.18 
 
 
412 aa  99  1e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3393  extracellular solute-binding protein family 1  25.42 
 
 
412 aa  98.2  3e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.205631 
 
 
-
 
NC_011071  Smal_2683  extracellular solute-binding protein family 1  23.64 
 
 
446 aa  97.8  3e-19  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.50155  normal 
 
 
-
 
NC_011881  Achl_4621  extracellular solute-binding protein family 1  27.48 
 
 
413 aa  94  4e-18  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009620  Smed_4557  extracellular solute-binding protein  25.13 
 
 
412 aa  92  1e-17  Sinorhizobium medicae WSM419  Bacteria  normal  0.302395  normal 
 
 
-
 
NC_010003  Pmob_0473  extracellular solute-binding protein  23.78 
 
 
420 aa  91.7  2e-17  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_012858  Rleg_6765  extracellular solute-binding protein family 1  24.5 
 
 
419 aa  90.1  7e-17  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.979933  normal 
 
 
-
 
NC_014212  Mesil_2466  extracellular solute-binding protein family 1  25.42 
 
 
415 aa  89.7  7e-17  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0930087 
 
 
-
 
NC_011366  Rleg2_5852  extracellular solute-binding protein family 1  23.48 
 
 
419 aa  89.7  1e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0354  extracellular solute-binding protein  25 
 
 
419 aa  89.4  1e-16  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.188589  n/a   
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  25.14 
 
 
424 aa  88.6  2e-16  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_009620  Smed_4916  extracellular solute-binding protein  23.5 
 
 
410 aa  88.2  2e-16  Sinorhizobium medicae WSM419  Bacteria  normal  0.06645  normal  0.512511 
 
 
-
 
NC_009636  Smed_2420  extracellular solute-binding protein  23.28 
 
 
420 aa  85.9  0.000000000000001  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.228974 
 
 
-
 
NC_013595  Sros_1494  ABC-type sugar transport system periplasmic component-like protein  25.88 
 
 
438 aa  85.5  0.000000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008243  Meso_4520  extracellular solute-binding protein  24.01 
 
 
415 aa  84  0.000000000000005  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0397  extracellular solute-binding protein  23.26 
 
 
428 aa  83.6  0.000000000000006  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2310  extracellular solute-binding protein family 1  22.25 
 
 
425 aa  82.4  0.00000000000001  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.00000000523246  n/a   
 
 
-
 
NC_012852  Rleg_6156  extracellular solute-binding protein family 1  24.33 
 
 
410 aa  81.6  0.00000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.889741  hitchhiker  0.000305646 
 
 
-
 
NC_013946  Mrub_0045  extracellular solute-binding protein family 1  25.78 
 
 
414 aa  81.3  0.00000000000003  Meiothermus ruber DSM 1279  Bacteria  normal  0.713374  normal 
 
 
-
 
NC_013093  Amir_1846  extracellular solute-binding protein family 1  24.53 
 
 
425 aa  80.9  0.00000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  0.169612  n/a   
 
 
-
 
NC_011371  Rleg2_6572  extracellular solute-binding protein family 1  24.63 
 
 
410 aa  81.3  0.00000000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00103217  normal  0.480926 
 
 
-
 
NC_008541  Arth_3146  extracellular solute-binding protein  22.19 
 
 
424 aa  80.1  0.00000000000007  Arthrobacter sp. FB24  Bacteria  normal  0.0629231  n/a   
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  26.83 
 
 
414 aa  79.7  0.00000000000009  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4057  extracellular solute-binding protein  23.42 
 
 
410 aa  79  0.0000000000002  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_2244  extracellular solute-binding protein family 1  23.53 
 
 
440 aa  78.6  0.0000000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0958946 
 
 
-
 
NC_007604  Synpcc7942_2417  transcriptional regulator, ABC transporter  22.54 
 
 
421 aa  78.2  0.0000000000003  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.0335393 
 
 
-
 
NC_014248  Aazo_0323  family 1 extracellular solute-binding protein  22.77 
 
 
432 aa  77.8  0.0000000000003  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3685  extracellular solute-binding protein  21.98 
 
 
432 aa  77.4  0.0000000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  23.71 
 
 
440 aa  77.8  0.0000000000004  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0631  extracellular solute-binding protein family 1  23.98 
 
 
435 aa  77.4  0.0000000000005  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011370  Rleg2_6090  extracellular solute-binding protein family 1  24.59 
 
 
425 aa  77  0.0000000000005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0954  extracellular solute-binding protein  21.64 
 
 
399 aa  77  0.0000000000006  Petrotoga mobilis SJ95  Bacteria  normal  0.0450213  n/a   
 
 
-
 
NC_014212  Mesil_0475  extracellular solute-binding protein family 1  23.95 
 
 
397 aa  76.3  0.0000000000009  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_7208  extracellular solute-binding protein family 1  22.13 
 
 
410 aa  76.3  0.0000000000009  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_0845  extracellular solute-binding protein family 1  23.47 
 
 
435 aa  75.1  0.000000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3270  extracellular solute-binding protein family 1  24.52 
 
 
435 aa  75.1  0.000000000002  Dickeya dadantii Ech703  Bacteria  normal  0.543416  n/a   
 
 
-
 
NC_011884  Cyan7425_2553  extracellular solute-binding protein family 1  22.15 
 
 
432 aa  74.7  0.000000000003  Cyanothece sp. PCC 7425  Bacteria  normal  0.964139  normal 
 
 
-
 
NC_013235  Namu_0514  extracellular solute-binding protein family 1  23.77 
 
 
426 aa  74.3  0.000000000004  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2297  extracellular solute-binding protein  24.08 
 
 
416 aa  74.3  0.000000000004  Serratia proteamaculans 568  Bacteria  normal  0.33558  normal 
 
 
-
 
NC_013521  Sked_21150  carbohydrate-binding protein  24.62 
 
 
428 aa  73.6  0.000000000006  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.396929  normal  0.174783 
 
 
-
 
NC_012669  Bcav_3572  extracellular solute-binding protein family 1  22.45 
 
 
427 aa  72.8  0.00000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.405751  normal 
 
 
-
 
NC_007952  Bxe_B0420  ABC sugar transporter, periplasmic ligand binding protein  21.85 
 
 
410 aa  72.8  0.00000000001  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3567  ABC transporter substrate binding protein (sorbitol)  27.65 
 
 
439 aa  72.8  0.00000000001  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012853  Rleg_5698  extracellular solute-binding protein family 1  23.89 
 
 
412 aa  72.8  0.00000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.145305  normal  0.141272 
 
 
-
 
NC_014165  Tbis_1090  extracellular solute-binding protein family 1  24.43 
 
 
436 aa  71.6  0.00000000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.667729  normal  0.0232634 
 
 
-
 
NC_012858  Rleg_6794  extracellular solute-binding protein family 1  21.99 
 
 
430 aa  72.4  0.00000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3339  Maltose-binding periplasmic protein/domains- like protein  21.75 
 
 
431 aa  72  0.00000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.202326 
 
 
-
 
NC_014151  Cfla_0501  extracellular solute-binding protein family 1  25.08 
 
 
433 aa  72  0.00000000002  Cellulomonas flavigena DSM 20109  Bacteria  decreased coverage  0.0000488029  hitchhiker  0.0000184856 
 
 
-
 
NC_012669  Bcav_3941  extracellular solute-binding protein family 1  25.15 
 
 
490 aa  72  0.00000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.486977 
 
 
-
 
NC_009616  Tmel_1017  extracellular solute-binding protein  24.55 
 
 
417 aa  72  0.00000000002  Thermosipho melanesiensis BI429  Bacteria  normal  0.0416471  n/a   
 
 
-
 
NC_009832  Spro_2571  extracellular solute-binding protein  24.62 
 
 
417 aa  71.2  0.00000000003  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  26.81 
 
 
420 aa  71.2  0.00000000003  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  24.63 
 
 
427 aa  70.9  0.00000000004  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0358  extracellular solute-binding protein family 1  21.11 
 
 
441 aa  70.9  0.00000000004  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3771  extracellular solute-binding protein  25.5 
 
 
421 aa  70.5  0.00000000006  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3450  extracellular solute-binding protein family 1  26.23 
 
 
436 aa  70.1  0.00000000007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  24.1 
 
 
445 aa  69.7  0.00000000009  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3553  extracellular solute-binding protein  22.67 
 
 
419 aa  69.3  0.0000000001  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1680  extracellular solute-binding protein family 1  27.47 
 
 
430 aa  69.3  0.0000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.173253  normal 
 
 
-
 
NC_010717  PXO_00880  ABC transporter sugar binding protein  22.33 
 
 
440 aa  69.3  0.0000000001  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.106592  n/a   
 
 
-
 
NC_010513  Xfasm12_1607  ABC transporter sugar-binding protein  22.46 
 
 
430 aa  68.2  0.0000000002  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3752  extracellular solute-binding protein family 1  26.23 
 
 
436 aa  68.2  0.0000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.561914  normal 
 
 
-
 
NC_010577  XfasM23_1550  extracellular solute-binding protein  22.46 
 
 
430 aa  68.6  0.0000000002  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0954  extracellular solute-binding protein  24.63 
 
 
411 aa  68.9  0.0000000002  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0523  extracellular solute-binding protein  23.1 
 
 
416 aa  68.6  0.0000000002  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0970  extracellular solute-binding protein  24.63 
 
 
411 aa  68.9  0.0000000002  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.000309876  n/a   
 
 
-
 
NC_009486  Tpet_0118  extracellular solute-binding protein  22.3 
 
 
420 aa  67  0.0000000005  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  22.86 
 
 
504 aa  67  0.0000000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007802  Jann_2588  extracellular solute-binding protein  28.51 
 
 
419 aa  67  0.0000000006  Jannaschia sp. CCS1  Bacteria  hitchhiker  0.000485668  normal 
 
 
-
 
NC_008312  Tery_1604  extracellular solute-binding protein  20.19 
 
 
425 aa  67  0.0000000006  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0284  extracellular solute-binding protein family 1  24.51 
 
 
414 aa  66.6  0.0000000007  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_0116  extracellular solute-binding protein  22.3 
 
 
420 aa  67  0.0000000007  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5398  ABC transporter substrate binding protein (sugar)  22.36 
 
 
403 aa  66.6  0.0000000007  Agrobacterium vitis S4  Bacteria  normal  0.14652  n/a   
 
 
-
 
NC_009718  Fnod_0450  extracellular solute-binding protein  25.44 
 
 
414 aa  66.6  0.0000000007  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.308403  n/a   
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  27.24 
 
 
458 aa  66.6  0.0000000008  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5349  extracellular solute-binding protein family 1  24.56 
 
 
406 aa  66.2  0.0000000009  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.535832 
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  27.24 
 
 
458 aa  66.2  0.000000001  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.24 
 
 
458 aa  66.2  0.000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.24 
 
 
458 aa  66.2  0.000000001  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  27.24 
 
 
458 aa  66.2  0.000000001  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  27.24 
 
 
458 aa  66.2  0.000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008010  Dgeo_2726  extracellular solute-binding protein  27.18 
 
 
437 aa  65.5  0.000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.290956  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  26.88 
 
 
458 aa  65.5  0.000000001  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011886  Achl_2663  extracellular solute-binding protein family 1  25.71 
 
 
468 aa  66.2  0.000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011831  Cagg_2267  extracellular solute-binding protein family 1  23.56 
 
 
445 aa  65.9  0.000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00064551 
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  25.4 
 
 
422 aa  65.5  0.000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009636  Smed_2358  extracellular solute-binding protein  23.88 
 
 
441 aa  65.5  0.000000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_3055  extracellular solute-binding protein family 1  24.88 
 
 
449 aa  64.7  0.000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_19900  extracellular solute-binding protein family 1  25.59 
 
 
415 aa  64.7  0.000000003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3329  extracellular solute-binding protein  25.6 
 
 
423 aa  64.7  0.000000003  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011894  Mnod_5667  extracellular solute-binding protein family 1  21.99 
 
 
410 aa  64.7  0.000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2504  extracellular solute-binding protein family 1  23.86 
 
 
442 aa  64.7  0.000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
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