10 homologs were found in PanDaTox collection
for query gene Rleg_4699 on replicon NC_012848
Organism: Rhizobium leguminosarum bv. trifolii WSM1325



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011368  Rleg2_4787  glycoside hydrolase family 3 domain protein  86.95 
 
 
2463 bp  2300    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.294133  normal 
 
 
-
 
NC_012848  Rleg_4699    100 
 
 
2462 bp  4881    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.194772  normal 
 
 
-
 
NC_011988  Avi_6257  hypothetical protein  79.21 
 
 
2472 bp  246  2.9999999999999997e-62  Agrobacterium vitis S4  Bacteria  normal  0.234906  n/a   
 
 
-
 
NC_010338  Caul_2140  Beta-glucosidase  86.84 
 
 
2247 bp  71.9  0.0000000008  Caulobacter sp. K31  Bacteria  normal  0.0303148  normal  0.0291608 
 
 
-
 
NC_010816  BLD_1945  beta-glucosidase-like glycosidase  88.89 
 
 
2274 bp  69.9  0.000000003  Bifidobacterium longum DJO10A  Bacteria  normal  0.0140662  n/a   
 
 
-
 
NC_013235  Namu_0886  glycoside hydrolase family 3 domain protein  87.3 
 
 
2256 bp  61.9  0.0000008  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0919  glycoside hydrolase family 3 protein  90.24 
 
 
2745 bp  50.1  0.003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_4330  glycoside hydrolase family 3 protein  84.62 
 
 
2511 bp  50.1  0.003  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.248566 
 
 
-
 
NC_013093  Amir_4612  glycoside hydrolase family 3 domain protein  88.89 
 
 
2316 bp  50.1  0.003  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6130  glycoside hydrolase family 3 domain protein  91.89 
 
 
2442 bp  50.1  0.003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0369131  decreased coverage  0.00080917 
 
 
-
 
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