More than 300 homologs were found in PanDaTox collection
for query gene Rleg2_2960 on replicon NC_011369
Organism: Rhizobium leguminosarum bv. trifolii WSM2304



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011369  Rleg2_2960  Methyltransferase type 11  100 
 
 
210 aa  428  1e-119  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3209  Methyltransferase type 11  91.9 
 
 
230 aa  364  1e-100  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_1298  Methyltransferase type 11  75.6 
 
 
210 aa  334  5e-91  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.356445  normal 
 
 
-
 
NC_011369  Rleg2_1209  Methyltransferase type 11  73.21 
 
 
210 aa  295  2e-79  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_0565  hypothetical protein  63.49 
 
 
183 aa  169  4e-41  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.00732681  n/a   
 
 
-
 
NC_011738  PCC7424_5793  Methyltransferase type 11  41.12 
 
 
219 aa  149  3e-35  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_002977  MCA1164  methyltransferase domain-containing protein  49.23 
 
 
150 aa  125  4.0000000000000003e-28  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0250614  n/a   
 
 
-
 
NC_007643  Rru_A0742  3-demethylubiquinone-9 3-methyltransferase  33.52 
 
 
249 aa  78.2  0.00000000000009  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.170942  n/a   
 
 
-
 
NC_011365  Gdia_0131  3-demethylubiquinone-9 3-methyltransferase  36.48 
 
 
253 aa  74.7  0.0000000000008  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.862077  normal  0.0873326 
 
 
-
 
NC_009092  Shew_3858  ubiquinone biosynthesis O-methyltransferase  34.4 
 
 
260 aa  74.3  0.000000000001  Shewanella loihica PV-4  Bacteria  normal  unclonable  0.00000301378 
 
 
-
 
NC_009674  Bcer98_0934  methyltransferase type 12  29.94 
 
 
228 aa  73.6  0.000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3237  ubiquinone biosynthesis O-methyltransferase  28.83 
 
 
258 aa  72.4  0.000000000005  Cyanothece sp. PCC 7425  Bacteria  normal  0.675115  normal  0.0534893 
 
 
-
 
NC_010718  Nther_2267  Methyltransferase type 11  37.86 
 
 
208 aa  72  0.000000000006  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_2768  3-demethylubiquinone-9 3-methyltransferase  32.67 
 
 
247 aa  72  0.000000000007  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_3550  3-demethylubiquinone-9 3-methyltransferase  32 
 
 
248 aa  70.9  0.00000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0947  3-demethylubiquinone-9 3-methyltransferase  33.57 
 
 
252 aa  70.5  0.00000000002  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7600  3-demethylubiquinone-9 3-methyltransferase  33.33 
 
 
254 aa  70.5  0.00000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.906312  normal  0.192206 
 
 
-
 
NC_008044  TM1040_2906  3-demethylubiquinone-9 3-methyltransferase  28.06 
 
 
247 aa  69.3  0.00000000004  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_0121  3-demethylubiquinone-9 3-methyltransferase  30.63 
 
 
276 aa  68.9  0.00000000005  Psychrobacter arcticus 273-4  Bacteria  normal  0.83628  normal 
 
 
-
 
NC_008709  Ping_2534  3-demethylubiquinone-9 3-methyltransferase  28.31 
 
 
254 aa  68.9  0.00000000005  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_2837  3-demethylubiquinone-9 3-methyltransferase  28.49 
 
 
247 aa  68.9  0.00000000006  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1324  methyltransferase type 11  27.33 
 
 
248 aa  68.6  0.00000000007  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.386033  hitchhiker  0.000000000822833 
 
 
-
 
NC_008686  Pden_2589  3-demethylubiquinone-9 3-methyltransferase  30.67 
 
 
262 aa  68.2  0.00000000009  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.672659 
 
 
-
 
NC_014148  Plim_2682  Methyltransferase type 12  28.88 
 
 
358 aa  67.4  0.0000000001  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.454648  n/a   
 
 
-
 
NC_014148  Plim_1055  glycosyl transferase family 2  28.21 
 
 
1162 aa  67.4  0.0000000001  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.289988  n/a   
 
 
-
 
NC_011725  BCB4264_A1264  hypothetical protein  30.34 
 
 
229 aa  67.4  0.0000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_1175  3-demethylubiquinone-9 3-methyltransferase  27.93 
 
 
247 aa  67.4  0.0000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.125464  n/a   
 
 
-
 
NC_010506  Swoo_4911  ubiquinone biosynthesis O-methyltransferase  30.99 
 
 
270 aa  66.2  0.0000000003  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.168902 
 
 
-
 
NC_011992  Dtpsy_1398  3-demethylubiquinone-9 3-methyltransferase  30.29 
 
 
237 aa  65.9  0.0000000004  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_2117  3-demethylubiquinone-9 3-methyltransferase  27.93 
 
 
262 aa  65.9  0.0000000004  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_2462  3-demethylubiquinone-9 3-methyltransferase  30.29 
 
 
237 aa  65.9  0.0000000004  Acidovorax sp. JS42  Bacteria  normal  normal  0.331199 
 
 
-
 
NC_008463  PA14_72050  hypothetical protein  28.48 
 
 
278 aa  65.9  0.0000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.892313  normal 
 
 
-
 
NC_009511  Swit_4502  3-demethylubiquinone-9 3-methyltransferase  28.43 
 
 
244 aa  65.5  0.0000000005  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.166087 
 
 
-
 
NC_008347  Mmar10_2260  3-demethylubiquinone-9 3-methyltransferase  32.09 
 
 
254 aa  65.5  0.0000000005  Maricaulis maris MCS10  Bacteria  normal  0.0516247  normal  0.429891 
 
 
-
 
NC_002977  MCA1272  3-demethylubiquinone-9 3-methyltransferase  29.89 
 
 
237 aa  65.5  0.0000000006  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_1958  3-demethylubiquinone-9 3-methyltransferase  30.57 
 
 
232 aa  65.5  0.0000000006  Pseudomonas aeruginosa PA7  Bacteria  normal  0.937117  n/a   
 
 
-
 
NC_007802  Jann_0298  3-demethylubiquinone-9 3-methyltransferase  31.58 
 
 
254 aa  65.1  0.0000000007  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_0130  3-demethylubiquinone-9 3-methyltransferase  28.57 
 
 
276 aa  65.1  0.0000000007  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0079  3-demethylubiquinone-9 3-methyltransferase  30.52 
 
 
253 aa  65.1  0.0000000008  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0762202 
 
 
-
 
NC_011772  BCG9842_B4077  hypothetical protein  28.97 
 
 
229 aa  65.1  0.0000000008  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_1113  bifunctional 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase  28.67 
 
 
241 aa  64.7  0.0000000009  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_1119  methyltransferase type 12  27.17 
 
 
229 aa  63.9  0.000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.582685  n/a   
 
 
-
 
NC_010424  Daud_1775  methyltransferase type 12  26.22 
 
 
298 aa  64.3  0.000000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2471  ubiquinone biosynthesis O-methyltransferase  27.04 
 
 
253 aa  64.3  0.000000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_23220  3-demethylubiquinone-9 3-methyltransferase  35.78 
 
 
232 aa  64.7  0.000000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0574161  hitchhiker  0.00443225 
 
 
-
 
NC_003909  BCE_1332  hypothetical protein  28.9 
 
 
229 aa  63.5  0.000000002  Bacillus cereus ATCC 10987  Bacteria  normal  0.999761  n/a   
 
 
-
 
NC_011658  BCAH187_A1370  hypothetical protein  28.9 
 
 
229 aa  63.9  0.000000002  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0839  3-demethylubiquinone-9 3-methyltransferase  30.43 
 
 
238 aa  63.5  0.000000002  Ralstonia pickettii 12D  Bacteria  normal  0.761497  normal  0.099255 
 
 
-
 
NC_007614  Nmul_A0252  2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase-like  27.12 
 
 
273 aa  63.5  0.000000002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.859955  n/a   
 
 
-
 
NC_010117  COXBURSA331_A0458  3-demethylubiquinone-9 3-methyltransferase  33.61 
 
 
234 aa  63.9  0.000000002  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1622  3-demethylubiquinone-9 3-methyltransferase  30.97 
 
 
242 aa  63.5  0.000000002  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_1729  3-demethylubiquinone-9 3-methyltransferase  33.61 
 
 
243 aa  63.5  0.000000002  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_2130  3-demethylubiquinone-9 3-methyltransferase  29.79 
 
 
241 aa  63.9  0.000000002  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.874721 
 
 
-
 
NC_009719  Plav_1325  methyltransferase type 12  27.71 
 
 
240 aa  63.2  0.000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  hitchhiker  0.000000000858625 
 
 
-
 
NC_008726  Mvan_2098  methyltransferase type 11  32.35 
 
 
263 aa  63.5  0.000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK1106  O-antigen biosynthesis protein; glycosyltransferase; methyltransferase  29.66 
 
 
229 aa  63.2  0.000000003  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2627  methyltransferase type 11  30.19 
 
 
306 aa  63.2  0.000000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3086  ubiquinone biosynthesis O-methyltransferase  33.12 
 
 
247 aa  62.8  0.000000003  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0869216  normal  0.516357 
 
 
-
 
NC_007925  RPC_0515  3-demethylubiquinone-9 3-methyltransferase  29.27 
 
 
254 aa  63.2  0.000000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0440194 
 
 
-
 
NC_008048  Sala_2143  3-demethylubiquinone-9 3-methyltransferase  28.5 
 
 
272 aa  63.2  0.000000003  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.136766  normal 
 
 
-
 
NC_009719  Plav_1742  ubiquinone biosynthesis O-methyltransferase  29.45 
 
 
253 aa  63.2  0.000000003  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.581641 
 
 
-
 
NC_011666  Msil_1561  ubiquinone biosynthesis O-methyltransferase  35.09 
 
 
256 aa  62.4  0.000000004  Methylocella silvestris BL2  Bacteria  n/a    normal  0.676344 
 
 
-
 
NC_007973  Rmet_0711  3-demethylubiquinone-9 3-methyltransferase  27.71 
 
 
247 aa  62.4  0.000000004  Cupriavidus metallidurans CH34  Bacteria  normal  0.0438785  normal 
 
 
-
 
NC_008340  Mlg_0910  3-demethylubiquinone-9 3-methyltransferase  33.61 
 
 
247 aa  62.8  0.000000004  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0607  3-demethylubiquinone-9 3-methyltransferase  29.87 
 
 
253 aa  62.4  0.000000005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.18812  n/a   
 
 
-
 
NC_009338  Mflv_4260  methyltransferase type 11  32.32 
 
 
261 aa  62.4  0.000000005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2861  ubiquinone biosynthesis O-methyltransferase  33.33 
 
 
240 aa  62  0.000000006  Marinomonas sp. MWYL1  Bacteria  normal  0.0308666  decreased coverage  0.000000000135895 
 
 
-
 
NC_007517  Gmet_2177  ubiquinone/menaquinone biosynthesis methylase-like protein  29.3 
 
 
345 aa  62  0.000000006  Geobacter metallireducens GS-15  Bacteria  normal  0.225032  hitchhiker  0.000137631 
 
 
-
 
NC_013132  Cpin_6087  Methyltransferase type 12  27.08 
 
 
263 aa  62  0.000000006  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS1132  hypothetical protein  28.32 
 
 
229 aa  61.6  0.000000007  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1225  hypothetical protein  28.32 
 
 
229 aa  61.6  0.000000007  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_2011  ubiquinone biosynthesis O-methyltransferase  35.09 
 
 
253 aa  62  0.000000007  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.3567 
 
 
-
 
NC_011773  BCAH820_1293  hypothetical protein  28.32 
 
 
229 aa  61.6  0.000000007  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00493379 
 
 
-
 
NC_005957  BT9727_1112  O-antigen biosynthesis protein; glycosyltransferase; methyltransferase  28.32 
 
 
229 aa  61.6  0.000000008  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1576  3-demethylubiquinone-9 3-methyltransferase  27.32 
 
 
229 aa  61.6  0.000000009  Methylobacillus flagellatus KT  Bacteria  normal  0.0819441  unclonable  0.000000165496 
 
 
-
 
NC_003295  RSc0898  3-demethylubiquinone-9 3-methyltransferase  31.46 
 
 
260 aa  60.8  0.00000001  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.000544337  normal  0.782574 
 
 
-
 
NC_004310  BR1872  3-demethylubiquinone-9 3-methyltransferase  29.56 
 
 
248 aa  60.8  0.00000001  Brucella suis 1330  Bacteria  normal  0.466783  n/a   
 
 
-
 
NC_010581  Bind_0448  methyltransferase type 12  26.25 
 
 
307 aa  60.8  0.00000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  decreased coverage  0.00834451  normal  0.0296348 
 
 
-
 
NC_009505  BOV_1803  3-demethylubiquinone-9 3-methyltransferase  29.56 
 
 
248 aa  60.8  0.00000001  Brucella ovis ATCC 25840  Bacteria  normal  0.0795517  n/a   
 
 
-
 
NC_007347  Reut_A2580  3-demethylubiquinone-9 3-methyltransferase  30.25 
 
 
249 aa  60.8  0.00000001  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3819  3-demethylubiquinone-9 3-methyltransferase  27.89 
 
 
248 aa  60.8  0.00000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1285  hypothetical protein  29.3 
 
 
249 aa  60.8  0.00000001  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0134  ubiquinone biosynthesis O-methyltransferase  31.08 
 
 
253 aa  60.8  0.00000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.200688  normal  0.270855 
 
 
-
 
NC_013526  Tter_2173  Methyltransferase type 11  36.67 
 
 
252 aa  61.2  0.00000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2828  3-demethylubiquinone-9 3-methyltransferase  31.9 
 
 
252 aa  60.8  0.00000001  Rhodoferax ferrireducens T118  Bacteria  normal  0.0566454  n/a   
 
 
-
 
NC_013510  Tcur_1144  Methyltransferase type 11  39.56 
 
 
337 aa  61.2  0.00000001  Thermomonospora curvata DSM 43183  Bacteria  normal  0.344527  n/a   
 
 
-
 
NC_011901  Tgr7_1530  3-demethylubiquinone-9 3-O-methyltransferase  30.11 
 
 
237 aa  61.2  0.00000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1845  3-demethylubiquinone-9 3-methyltransferase  34.26 
 
 
234 aa  60.8  0.00000001  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.00431464  normal  0.756459 
 
 
-
 
NC_009363  OSTLU_16685  predicted protein  30.32 
 
 
218 aa  60.8  0.00000001  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.313345  normal 
 
 
-
 
NC_009831  Ssed_4499  3-demethylubiquinone-9 3-O-methyltransferase  33.33 
 
 
266 aa  61.2  0.00000001  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000000152328 
 
 
-
 
NC_011894  Mnod_0108  ubiquinone biosynthesis O-methyltransferase  28.82 
 
 
249 aa  60.1  0.00000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0946  3-demethylubiquinone-9 3-methyltransferase  32.03 
 
 
232 aa  60.5  0.00000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_013422  Hneap_0237  Methyltransferase type 11  33.98 
 
 
248 aa  60.5  0.00000002  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0575  ubiquinone biosynthesis O-methyltransferase  27.85 
 
 
245 aa  60.5  0.00000002  Halorhodospira halophila SL1  Bacteria  normal  0.931708  n/a   
 
 
-
 
NC_007958  RPD_0100  3-demethylubiquinone-9 3-methyltransferase  28.65 
 
 
253 aa  60.1  0.00000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.294916 
 
 
-
 
NC_007963  Csal_1858  3-demethylubiquinone-9 3-methyltransferase  31.4 
 
 
245 aa  60.5  0.00000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3002  3-demethylubiquinone-9 3-methyltransferase  29.25 
 
 
253 aa  60.5  0.00000002  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1918  3-demethylubiquinone-9 3-methyltransferase  29.65 
 
 
236 aa  60.5  0.00000002  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00158805  hitchhiker  0.0000000749006 
 
 
-
 
NC_008345  Sfri_2131  3-demethylubiquinone-9 3-methyltransferase  28.05 
 
 
240 aa  60.5  0.00000002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1971  3-demethylubiquinone-9 3-methyltransferase  29.65 
 
 
236 aa  60.8  0.00000002  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.000321939  hitchhiker  0.00000717465 
 
 
-
 
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