12 homologs were found in PanDaTox collection
for query gene Rfer_3073 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_3073  hypothetical protein  100 
 
 
334 aa  672    Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0008  hypothetical protein  51.83 
 
 
327 aa  323  3e-87  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0279  hypothetical protein  40.26 
 
 
338 aa  242  7e-63  Shewanella amazonensis SB2B  Bacteria  normal  0.739829  normal 
 
 
-
 
NC_008686  Pden_2089  hypothetical protein  33.94 
 
 
334 aa  164  3e-39  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.164933 
 
 
-
 
NC_013061  Phep_0937  hypothetical protein  28.79 
 
 
333 aa  103  4e-21  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.0000101235 
 
 
-
 
NC_011989  Avi_2745  hypothetical protein  30.45 
 
 
327 aa  98.6  1e-19  Agrobacterium vitis S4  Bacteria  normal  0.379235  n/a   
 
 
-
 
NC_009380  Strop_0573  hypothetical protein  34.81 
 
 
329 aa  83.6  0.000000000000005  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_4268  hypothetical protein  29.48 
 
 
318 aa  79.7  0.00000000000007  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_0753  hypothetical protein  27.63 
 
 
333 aa  69.3  0.0000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007577  PMT9312_0374  hypothetical protein  23.01 
 
 
330 aa  63.2  0.000000006  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3930  hypothetical protein  25.26 
 
 
323 aa  45.1  0.002  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2862  hypothetical protein  23.05 
 
 
334 aa  44.3  0.003  Jannaschia sp. CCS1  Bacteria  normal  0.190658  normal 
 
 
-
 
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