More than 300 homologs were found in PanDaTox collection
for query gene Rfer_0573 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_0573  MarR family transcriptional regulator  100 
 
 
151 aa  304  2.0000000000000002e-82  Rhodoferax ferrireducens T118  Bacteria  normal  0.256198  n/a   
 
 
-
 
NC_007948  Bpro_0623  MarR family transcriptional regulator  66.23 
 
 
151 aa  211  2.9999999999999995e-54  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0483  MarR family transcriptional regulator  64.83 
 
 
151 aa  187  2.9999999999999997e-47  Acidovorax sp. JS42  Bacteria  normal  normal  0.0397178 
 
 
-
 
NC_011992  Dtpsy_0474  transcriptional regulator, MarR family  63.33 
 
 
155 aa  186  1e-46  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4966  transcriptional regulator, MarR family  61.07 
 
 
153 aa  184  3e-46  Variovorax paradoxus S110  Bacteria  normal  0.345847  n/a   
 
 
-
 
NC_010002  Daci_1196  MarR family transcriptional regulator  61.07 
 
 
155 aa  183  7e-46  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3619  organic hydroperoxide resistance transcriptional regulator  63.97 
 
 
162 aa  179  9.000000000000001e-45  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5560  MarR family transcriptional regulator  59.33 
 
 
170 aa  177  2.9999999999999997e-44  Ralstonia eutropha JMP134  Bacteria  normal  0.813118  n/a   
 
 
-
 
NC_009719  Plav_2251  MarR family transcriptional regulator  62.41 
 
 
145 aa  177  4e-44  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.344689  normal  0.255238 
 
 
-
 
NC_008752  Aave_4271  MarR family transcriptional regulator  60.74 
 
 
156 aa  172  1.9999999999999998e-42  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0653897  normal  0.661065 
 
 
-
 
NC_008825  Mpe_A0057  MarR family transcriptional regulator  65.65 
 
 
185 aa  169  2e-41  Methylibium petroleiphilum PM1  Bacteria  normal  0.584189  normal  0.103539 
 
 
-
 
NC_009436  Ent638_0519  MarR family transcriptional regulator  62.9 
 
 
150 aa  165  2e-40  Enterobacter sp. 638  Bacteria  normal  hitchhiker  0.00587381 
 
 
-
 
NC_009832  Spro_0129  MarR family transcriptional regulator  54.05 
 
 
154 aa  165  2e-40  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS02614  putative transcription regulator protein  58.7 
 
 
153 aa  164  4e-40  Ralstonia solanacearum GMI1000  Bacteria  normal  0.532202  normal  0.750512 
 
 
-
 
NC_009485  BBta_0108  organic hydroperoxide resistance transcriptional regulator  59.86 
 
 
152 aa  163  5.9999999999999996e-40  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.879191 
 
 
-
 
NC_009439  Pmen_2629  MarR family transcriptional regulator  58.39 
 
 
160 aa  163  5.9999999999999996e-40  Pseudomonas mendocina ymp  Bacteria  normal  0.8863  normal 
 
 
-
 
NC_012560  Avin_15300  transcriptional regulator, MarR family  59.85 
 
 
162 aa  163  5.9999999999999996e-40  Azotobacter vinelandii DJ  Bacteria  normal  0.408936  n/a   
 
 
-
 
NC_012880  Dd703_0519  transcriptional regulator, MarR family  58.27 
 
 
157 aa  163  8e-40  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1768  transcriptional regulator, MarR family  57.35 
 
 
157 aa  161  3e-39  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_27230  MarR family transcriptional regulator  56.83 
 
 
151 aa  161  3e-39  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_1670  transcriptional regulator, MarR family  57.46 
 
 
161 aa  160  4.0000000000000004e-39  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.428433  normal 
 
 
-
 
NC_007005  Psyr_3626  regulatory protein, MarR  55.56 
 
 
157 aa  160  4.0000000000000004e-39  Pseudomonas syringae pv. syringae B728a  Bacteria  unclonable  0.0000000021465  normal  0.0936579 
 
 
-
 
NC_009504  BOV_A0830  MarR family transcriptional regulator  56.74 
 
 
151 aa  160  5.0000000000000005e-39  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0401  transcriptional regulator, MarR family  53.95 
 
 
156 aa  160  7e-39  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0886  MarR family transcriptional regulator  56.74 
 
 
151 aa  159  9e-39  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1189  transcriptional regulator MarR family  53.69 
 
 
158 aa  159  9e-39  Agrobacterium vitis S4  Bacteria  normal  0.622384  n/a   
 
 
-
 
NC_010501  PputW619_1470  MarR family transcriptional regulator  57.66 
 
 
151 aa  159  1e-38  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_03887  transcriptional regulator MarR family  60.29 
 
 
152 aa  159  1e-38  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2950  transcriptional regulator, MarR family  55.88 
 
 
149 aa  159  2e-38  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3854  MarR family transcriptional regulator  56.2 
 
 
151 aa  158  3e-38  Pseudomonas putida F1  Bacteria  normal  0.113287  normal  0.119098 
 
 
-
 
NC_013440  Hoch_1641  transcriptional regulator, MarR family  54.25 
 
 
157 aa  157  4e-38  Haliangium ochraceum DSM 14365  Bacteria  normal  0.176874  normal 
 
 
-
 
NC_009656  PSPA7_2306  putative transcriptional regulator  56.12 
 
 
151 aa  157  4e-38  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1328  transcriptional regulator, MarR family  54.41 
 
 
149 aa  157  6e-38  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1435  MarR family transcriptional regulator  62.07 
 
 
151 aa  155  1e-37  Pseudomonas putida GB-1  Bacteria  normal  normal  0.209441 
 
 
-
 
NC_002947  PP_1860  MarR family transcriptional regulator  62.07 
 
 
151 aa  155  2e-37  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1808  MarR family transcriptional regulator  56.03 
 
 
159 aa  155  3e-37  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3996  MarR family transcriptional regulator  53.02 
 
 
154 aa  154  4e-37  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.0000000674162  normal  0.401287 
 
 
-
 
NC_012856  Rpic12D_3097  transcriptional regulator, MarR family  60.42 
 
 
153 aa  154  5.0000000000000005e-37  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3444  transcriptional regulator, MarR family  60.42 
 
 
153 aa  154  5.0000000000000005e-37  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5144  MarR family transcriptional regulator  58.7 
 
 
156 aa  154  5.0000000000000005e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2845  transcriptional regulator, MarR family  52.9 
 
 
145 aa  153  9e-37  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.648486  normal 
 
 
-
 
NC_010172  Mext_2174  regulatory protein MarR  54.61 
 
 
154 aa  152  2e-36  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.363681 
 
 
-
 
NC_011666  Msil_2325  transcriptional regulator, MarR family  53.73 
 
 
162 aa  152  2e-36  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0434242 
 
 
-
 
NC_010725  Mpop_2137  transcriptional regulator, MarR family  53.19 
 
 
154 aa  152  2e-36  Methylobacterium populi BJ001  Bacteria  normal  normal  0.727084 
 
 
-
 
NC_011757  Mchl_2452  transcriptional regulator, MarR family  54.61 
 
 
154 aa  151  2.9999999999999998e-36  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.126734  normal 
 
 
-
 
NC_009668  Oant_3291  MarR family transcriptional regulator  52.48 
 
 
152 aa  150  5e-36  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.570613  n/a   
 
 
-
 
NC_007643  Rru_A0021  MarR family transcriptional regulator  56.06 
 
 
178 aa  148  2e-35  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1742  MarR family transcriptional regulator  58.4 
 
 
149 aa  148  2e-35  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_2928  MarR family transcriptional regulator  52.52 
 
 
143 aa  147  4e-35  Ruegeria sp. TM1040  Bacteria  normal  normal  0.442252 
 
 
-
 
NC_011894  Mnod_4766  transcriptional regulator, MarR family  51.8 
 
 
166 aa  147  6e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.462626  n/a   
 
 
-
 
NC_008345  Sfri_0803  transcriptional regulator, MarR family protein  48.57 
 
 
148 aa  146  8e-35  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0421  MarR family transcriptional regulator  52.14 
 
 
150 aa  146  8e-35  Marinomonas sp. MWYL1  Bacteria  normal  0.0670441  normal 
 
 
-
 
NC_011894  Mnod_1113  transcriptional regulator, TrmB  55.3 
 
 
167 aa  146  1.0000000000000001e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4410  MarR family transcriptional regulator  56.72 
 
 
176 aa  144  4.0000000000000006e-34  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_4256  MarR family transcriptional regulator  51.08 
 
 
166 aa  144  5e-34  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.973283 
 
 
-
 
NC_003910  CPS_3331  MarR family transcriptional regulator  49.65 
 
 
155 aa  143  7.0000000000000006e-34  Colwellia psychrerythraea 34H  Bacteria  normal  0.376124  n/a   
 
 
-
 
NC_009338  Mflv_0960  MarR family transcriptional regulator  53.68 
 
 
146 aa  143  7.0000000000000006e-34  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.305429  normal  0.461467 
 
 
-
 
NC_007952  Bxe_B2842  MarR family transcriptional regulator  58.78 
 
 
150 aa  142  2e-33  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0576  transcriptional regulator, TrmB  48.23 
 
 
158 aa  142  2e-33  Sinorhizobium medicae WSM419  Bacteria  normal  0.0950259  normal 
 
 
-
 
NC_010676  Bphyt_6797  transcriptional regulator, MarR family  57.78 
 
 
150 aa  142  2e-33  Burkholderia phytofirmans PsJN  Bacteria  decreased coverage  0.0000000000341321  decreased coverage  0.0000000109708 
 
 
-
 
NC_009665  Shew185_3498  MarR family transcriptional regulator  51.03 
 
 
165 aa  140  4e-33  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0649  transcriptional regulator, MarR family  47.45 
 
 
150 aa  141  4e-33  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_1134  MarR family transcriptional regulator  59.17 
 
 
144 aa  141  4e-33  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3311  MarR family transcriptional regulator  48.34 
 
 
165 aa  141  4e-33  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0866  MarR family transcriptional regulator  51.03 
 
 
165 aa  140  5e-33  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4558  MarR family transcriptional regulator  46.43 
 
 
150 aa  140  5e-33  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3426  transcriptional regulator, MarR family  51.03 
 
 
165 aa  140  5e-33  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3621  MarR family transcriptional regulator  51.03 
 
 
165 aa  140  5e-33  Shewanella baltica OS195  Bacteria  normal  normal  0.597701 
 
 
-
 
NC_011725  BCB4264_A4585  transcriptional regulator, MarR family  53.98 
 
 
150 aa  140  5e-33  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B2231  MarR family transcriptional regulator  55.15 
 
 
150 aa  140  5e-33  Burkholderia sp. 383  Bacteria  normal  0.106154  normal  0.474897 
 
 
-
 
NC_010725  Mpop_0861  transcriptional regulator, MarR family  50.68 
 
 
161 aa  140  5e-33  Methylobacterium populi BJ001  Bacteria  normal  normal  0.440211 
 
 
-
 
NC_010552  BamMC406_3762  MarR family transcriptional regulator  54.41 
 
 
150 aa  140  6e-33  Burkholderia ambifaria MC40-6  Bacteria  normal  0.425599  hitchhiker  0.00135953 
 
 
-
 
NC_008726  Mvan_1524  MarR family transcriptional regulator  62.96 
 
 
149 aa  140  6e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.26569  normal 
 
 
-
 
NC_008321  Shewmr4_0815  MarR family transcriptional regulator  48.97 
 
 
165 aa  140  7e-33  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.0000550088 
 
 
-
 
NC_008391  Bamb_3233  MarR family transcriptional regulator  54.41 
 
 
150 aa  140  7e-33  Burkholderia ambifaria AMMD  Bacteria  normal  0.550723  normal  0.0343876 
 
 
-
 
NC_011658  BCAH187_A4603  transcriptional regulator, MarR family  46.72 
 
 
150 aa  140  9e-33  Bacillus cereus AH187  Bacteria  normal  0.221434  n/a   
 
 
-
 
NC_005945  BAS4364  MarR family transcriptional regulator  46.72 
 
 
150 aa  139  9.999999999999999e-33  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4200  organic hydroperoxide resistance transcriptional regulator  46.72 
 
 
150 aa  139  9.999999999999999e-33  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4211  organic hydroperoxide resistance transcriptional regulator  46.72 
 
 
150 aa  139  9.999999999999999e-33  Bacillus cereus E33L  Bacteria  normal  0.151141  n/a   
 
 
-
 
NC_007530  GBAA_4699  MarR family transcriptional regulator  46.72 
 
 
150 aa  139  9.999999999999999e-33  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3056  MarR family transcriptional regulator  50 
 
 
168 aa  139  9.999999999999999e-33  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1203  transcriptional regulator, TrmB  55.3 
 
 
146 aa  139  9.999999999999999e-33  Mycobacterium sp. JLS  Bacteria  normal  0.529625  normal  0.0362733 
 
 
-
 
NC_010506  Swoo_0934  MarR family transcriptional regulator  57.5 
 
 
163 aa  139  9.999999999999999e-33  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_4554  transcriptional regulator, MarR family  46.72 
 
 
150 aa  139  9.999999999999999e-33  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009720  Xaut_0061  MarR family transcriptional regulator  48.51 
 
 
171 aa  139  9.999999999999999e-33  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.310818 
 
 
-
 
NC_007778  RPB_3240  MarR family transcriptional regulator  52.27 
 
 
158 aa  138  1.9999999999999998e-32  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.715513  normal 
 
 
-
 
NC_010515  Bcenmc03_3662  MarR family transcriptional regulator  54.81 
 
 
150 aa  139  1.9999999999999998e-32  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.485543  normal 
 
 
-
 
NC_008061  Bcen_4499  MarR family transcriptional regulator  54.81 
 
 
150 aa  139  1.9999999999999998e-32  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.148368  n/a   
 
 
-
 
NC_008322  Shewmr7_3208  MarR family transcriptional regulator  48.97 
 
 
165 aa  139  1.9999999999999998e-32  Shewanella sp. MR-7  Bacteria  normal  normal  0.469767 
 
 
-
 
NC_008543  Bcen2424_3865  MarR family transcriptional regulator  54.81 
 
 
150 aa  139  1.9999999999999998e-32  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0792032  normal 
 
 
-
 
NC_008700  Sama_0628  MarR family transcriptional regulator  54.81 
 
 
144 aa  139  1.9999999999999998e-32  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0886  transcriptional regulator, MarR family  50 
 
 
161 aa  139  1.9999999999999998e-32  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.541526  normal  0.759862 
 
 
-
 
NC_007650  BTH_II0598  MarR family transcriptional regulator  54.74 
 
 
267 aa  138  3e-32  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4880  MarR family transcriptional regulator  55.15 
 
 
157 aa  138  3e-32  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.368926  hitchhiker  0.00140951 
 
 
-
 
NC_010172  Mext_0925  regulatory protein MarR  50 
 
 
195 aa  138  3e-32  Methylobacterium extorquens PA1  Bacteria  normal  0.101489  normal 
 
 
-
 
NC_009784  VIBHAR_04763  hypothetical protein  53.08 
 
 
143 aa  137  3.9999999999999997e-32  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010511  M446_2151  MarR family transcriptional regulator  53.03 
 
 
153 aa  137  3.9999999999999997e-32  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.680053 
 
 
-
 
NC_010184  BcerKBAB4_4312  MarR family transcriptional regulator  52.14 
 
 
150 aa  137  3.9999999999999997e-32  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3597  MarR family transcriptional regulator  51.91 
 
 
153 aa  137  3.9999999999999997e-32  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4792  transcriptional regulator, MarR family  50.36 
 
 
147 aa  137  3.9999999999999997e-32  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0729618  n/a   
 
 
-
 
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