7 homologs were found in PanDaTox collection
for query gene Rfer_0152 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_0152  hypothetical protein  100 
 
 
99 aa  206  7e-53  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2396  hypothetical protein  37.8 
 
 
125 aa  62.8  0.000000001  Caulobacter sp. K31  Bacteria  normal  normal  0.303966 
 
 
-
 
NC_013457  VEA_000785  hypothetical protein  34.69 
 
 
104 aa  63.2  0.000000001  Vibrio sp. Ex25  Bacteria  normal  0.2889  n/a   
 
 
-
 
NC_009441  Fjoh_0478  hypothetical protein  38.82 
 
 
101 aa  61.2  0.000000005  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_1798  hypothetical protein  36.84 
 
 
107 aa  58.9  0.00000002  Ruegeria sp. TM1040  Bacteria  decreased coverage  0.00123437  normal  0.0181915 
 
 
-
 
NC_008391  Bamb_4312  hypothetical protein  34.09 
 
 
122 aa  55.5  0.0000003  Burkholderia ambifaria AMMD  Bacteria  normal  0.372671  normal  0.658143 
 
 
-
 
NC_007802  Jann_0879  hypothetical protein  37.74 
 
 
85 aa  45.8  0.0002  Jannaschia sp. CCS1  Bacteria  normal  0.650248  normal  0.0435568 
 
 
-
 
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