More than 300 homologs were found in PanDaTox collection
for query gene Reut_A0522 on replicon NC_007347
Organism: Ralstonia eutropha JMP134



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007347  Reut_A0522  LuxR response regulator receiver  100 
 
 
212 aa  426  1e-118  Ralstonia eutropha JMP134  Bacteria  decreased coverage  0.000276468  n/a   
 
 
-
 
NC_011205  SeD_A0598  transcriptional regulator FimZ  37.75 
 
 
210 aa  145  3e-34  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.110504 
 
 
-
 
NC_011149  SeAg_B0595  transcriptional regulator FimZ  37.75 
 
 
210 aa  145  3e-34  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.447967  n/a   
 
 
-
 
NC_011094  SeSA_A0594  transcriptional regulator FimZ  37.75 
 
 
210 aa  144  9e-34  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.627077  hitchhiker  0.00790766 
 
 
-
 
NC_010676  Bphyt_6883  two component transcriptional regulator, LuxR family  40.78 
 
 
213 aa  144  9e-34  Burkholderia phytofirmans PsJN  Bacteria  normal  0.239531  normal  0.170628 
 
 
-
 
NC_011080  SNSL254_A0602  transcriptional regulator FimZ  37.75 
 
 
210 aa  144  9e-34  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.379869  normal  0.0923244 
 
 
-
 
NC_011083  SeHA_C0659  transcriptional regulator FimZ  37.75 
 
 
210 aa  144  9e-34  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.611229  normal 
 
 
-
 
NC_010623  Bphy_4331  two component LuxR family transcriptional regulator  41 
 
 
212 aa  143  2e-33  Burkholderia phymatum STM815  Bacteria  normal  0.748519  normal 
 
 
-
 
NC_007974  Rmet_5714  two component LuxR family transcriptional regulator  37.98 
 
 
210 aa  142  5e-33  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4470  two component LuxR family transcriptional regulator  40.1 
 
 
232 aa  140  9.999999999999999e-33  Ralstonia eutropha JMP134  Bacteria  normal  0.370568  n/a   
 
 
-
 
NC_007952  Bxe_B2928  two component LuxR family transcriptional regulator  40.1 
 
 
213 aa  140  9.999999999999999e-33  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5940  LuxR family response regulator  39.02 
 
 
220 aa  135  5e-31  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.000000781929  normal 
 
 
-
 
NC_007973  Rmet_0459  two component LuxR family transcriptional regulator  39.13 
 
 
207 aa  132  5e-30  Cupriavidus metallidurans CH34  Bacteria  normal  0.957088  normal 
 
 
-
 
NC_007348  Reut_B5536  LuxR response regulator receiver  39.42 
 
 
209 aa  130  1.0000000000000001e-29  Ralstonia eutropha JMP134  Bacteria  normal  0.882777  n/a   
 
 
-
 
CP001509  ECD_00485  predicted DNA-binding transcriptional regulator  33.17 
 
 
210 aa  129  2.0000000000000002e-29  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_00490  hypothetical protein  33.17 
 
 
210 aa  129  2.0000000000000002e-29  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A0610  transcriptional regulator FimZ  33.17 
 
 
210 aa  129  2.0000000000000002e-29  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3087  transcriptional regulator FimZ  33.17 
 
 
210 aa  129  2.0000000000000002e-29  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
CP001637  EcDH1_3078  two component transcriptional regulator, LuxR family  33.17 
 
 
210 aa  129  3e-29  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_0636  transcriptional regulator FimZ  33.17 
 
 
210 aa  129  3e-29  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.931873  normal  0.250092 
 
 
-
 
NC_009801  EcE24377A_0577  transcriptional regulator FimZ  33.17 
 
 
210 aa  129  3e-29  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0993  transcriptional regulator FimZ  34.63 
 
 
210 aa  129  4.0000000000000003e-29  Enterobacter sp. 638  Bacteria  normal  hitchhiker  0.000287084 
 
 
-
 
NC_010498  EcSMS35_0580  transcriptional regulator FimZ  33.17 
 
 
210 aa  129  4.0000000000000003e-29  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2093  putative two-component response regulator  37.25 
 
 
207 aa  124  9e-28  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1119  two component LuxR family transcriptional regulator  37.8 
 
 
208 aa  124  1e-27  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_12780  putative two-component response regulator  34.95 
 
 
209 aa  122  3e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.000000000436161  normal 
 
 
-
 
NC_008463  PA14_24710  putative two-component response regulator  36.76 
 
 
207 aa  122  3e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_1160  putative two-component response regulator  35.12 
 
 
209 aa  122  6e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0122525  n/a   
 
 
-
 
NC_009656  PSPA7_0036  putative two-component response regulator  41.24 
 
 
207 aa  119  1.9999999999999998e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  0.035019  n/a   
 
 
-
 
NC_008463  PA14_00430  putative two-component response regulator  41.24 
 
 
207 aa  119  1.9999999999999998e-26  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.247974 
 
 
-
 
NC_007492  Pfl01_3974  two component LuxR family transcriptional regulator  33.65 
 
 
208 aa  119  3.9999999999999996e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4334  two component LuxR family transcriptional regulator  39.18 
 
 
209 aa  119  3.9999999999999996e-26  Burkholderia phymatum STM815  Bacteria  normal  0.255025  normal 
 
 
-
 
NC_010322  PputGB1_4322  two component LuxR family transcriptional regulator  36.71 
 
 
207 aa  118  4.9999999999999996e-26  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_2160  LuxR family DNA-binding response regulator  36.11 
 
 
210 aa  119  4.9999999999999996e-26  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_2269  two component LuxR family transcriptional regulator  36.11 
 
 
210 aa  119  4.9999999999999996e-26  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_1090  LuxR family DNA-binding response regulator  36.23 
 
 
207 aa  117  9.999999999999999e-26  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_1131  two component LuxR family transcriptional regulator  36.23 
 
 
236 aa  117  1.9999999999999998e-25  Pseudomonas putida F1  Bacteria  normal  0.796271  normal  0.799889 
 
 
-
 
NC_010159  YpAngola_A2113  LuxR family DNA-binding response regulator  35.56 
 
 
210 aa  115  6e-25  Yersinia pestis Angola  Bacteria  normal  normal  0.616678 
 
 
-
 
NC_010676  Bphyt_6866  two component transcriptional regulator, LuxR family  40.36 
 
 
202 aa  115  6.9999999999999995e-25  Burkholderia phytofirmans PsJN  Bacteria  normal  0.140006  normal  0.169631 
 
 
-
 
NC_004578  PSPTO_4151  DNA-binding response regulator, LuxR family  33.97 
 
 
208 aa  113  2.0000000000000002e-24  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.35782  n/a   
 
 
-
 
NC_007005  Psyr_3890  LuxR response regulator receiver  33.97 
 
 
208 aa  113  2.0000000000000002e-24  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.330128 
 
 
-
 
NC_007492  Pfl01_4515  two component LuxR family transcriptional regulator  33.49 
 
 
208 aa  111  6e-24  Pseudomonas fluorescens Pf0-1  Bacteria  normal  hitchhiker  0.00786387 
 
 
-
 
NC_007005  Psyr_2114  LuxR response regulator receiver  34.46 
 
 
212 aa  110  1.0000000000000001e-23  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.22828 
 
 
-
 
NC_010658  SbBS512_E0462  transcriptional regulator FimZ  31.44 
 
 
199 aa  110  1.0000000000000001e-23  Shigella boydii CDC 3083-94  Bacteria  normal  0.739138  n/a   
 
 
-
 
NC_009512  Pput_3638  two component LuxR family transcriptional regulator  34.09 
 
 
205 aa  108  7.000000000000001e-23  Pseudomonas putida F1  Bacteria  normal  normal  0.489861 
 
 
-
 
NC_002947  PP_2101  LuxR family DNA-binding response regulator  34.09 
 
 
207 aa  108  8.000000000000001e-23  Pseudomonas putida KT2440  Bacteria  decreased coverage  0.00862279  normal  0.220235 
 
 
-
 
NC_010501  PputW619_2781  two component LuxR family transcriptional regulator  35.96 
 
 
204 aa  107  1e-22  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1643  two component LuxR family transcriptional regulator  33.52 
 
 
205 aa  107  1e-22  Pseudomonas putida GB-1  Bacteria  hitchhiker  0.003137  normal 
 
 
-
 
NC_007952  Bxe_B2906  two component LuxR family transcriptional regulator  38.24 
 
 
203 aa  106  2e-22  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1620  two component LuxR family transcriptional regulator  31.43 
 
 
206 aa  107  2e-22  Pseudomonas putida W619  Bacteria  normal  normal  0.0222153 
 
 
-
 
NC_002947  PP_3412  LuxR family DNA-binding response regulator  34.12 
 
 
204 aa  100  2e-20  Pseudomonas putida KT2440  Bacteria  normal  normal  0.338288 
 
 
-
 
NC_009379  Pnuc_1808  two component LuxR family transcriptional regulator  31.43 
 
 
207 aa  100  2e-20  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  hitchhiker  0.000516369  n/a   
 
 
-
 
NC_009512  Pput_2350  two component LuxR family transcriptional regulator  34.12 
 
 
204 aa  100  2e-20  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_2499  two component LuxR family transcriptional regulator  38.85 
 
 
209 aa  99.4  4e-20  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.449467  n/a   
 
 
-
 
NC_010159  YpAngola_A1688  LuxR family DNA-binding response regulator  38.85 
 
 
209 aa  99.4  4e-20  Yersinia pestis Angola  Bacteria  hitchhiker  0.000000202542  normal  0.0533619 
 
 
-
 
NC_009708  YpsIP31758_2402  LuxR family DNA-binding response regulator  38.85 
 
 
209 aa  99.4  4e-20  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.0000000000000137953  n/a   
 
 
-
 
NC_009438  Sputcn32_0304  two component LuxR family transcriptional regulator  32.58 
 
 
207 aa  99.4  4e-20  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2528  two component LuxR family transcriptional regulator  33.53 
 
 
204 aa  97.8  9e-20  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0522002 
 
 
-
 
NC_014211  Ndas_5233  two component transcriptional regulator, LuxR family  34.44 
 
 
223 aa  95.5  5e-19  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.114456  hitchhiker  0.000738291 
 
 
-
 
NC_007333  Tfu_2582  LuxR response regulator receiver  33.89 
 
 
233 aa  94.7  1e-18  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1775  two component transcriptional regulator, LuxR family  38.46 
 
 
209 aa  93.2  2e-18  Pectobacterium wasabiae WPP163  Bacteria  normal  0.814588  n/a   
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  35.23 
 
 
213 aa  93.2  3e-18  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  34.44 
 
 
211 aa  92.4  4e-18  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1369  two component transcriptional regulator, LuxR family  37.42 
 
 
218 aa  92  5e-18  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.380225  n/a   
 
 
-
 
NC_013131  Caci_6044  two component transcriptional regulator, LuxR family  33.7 
 
 
226 aa  90.9  1e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  31.67 
 
 
216 aa  90.5  1e-17  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  30.81 
 
 
218 aa  90.1  2e-17  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0174  two component transcriptional regulator, LuxR family  28.92 
 
 
208 aa  90.1  2e-17  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  32.77 
 
 
214 aa  90.1  2e-17  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_011353  ECH74115_0438  transcriptional regulatory protein UhpA  38.75 
 
 
209 aa  89.4  3e-17  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_06590  DNA-binding response regulator, LuxR family protein  25.24 
 
 
210 aa  89  5e-17  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_6085  two component transcriptional regulator, LuxR family  35.36 
 
 
217 aa  89  5e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  33.73 
 
 
213 aa  89  5e-17  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4335  two component LuxR family transcriptional regulator  38.22 
 
 
194 aa  88.6  6e-17  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_0659  fimbrial Z protein; signal transducer  30.3 
 
 
212 aa  88.6  7e-17  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.379451 
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  34.29 
 
 
228 aa  88.2  8e-17  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal 
 
 
-
 
NC_008061  Bcen_5187  two component LuxR family transcriptional regulator  33.91 
 
 
214 aa  88.2  8e-17  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5672  two component LuxR family transcriptional regulator  33.91 
 
 
214 aa  88.2  8e-17  Burkholderia cenocepacia HI2424  Bacteria  normal  hitchhiker  0.00685344 
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  33.91 
 
 
214 aa  88.2  8e-17  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0560765 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  33.52 
 
 
212 aa  88.2  9e-17  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_3186  two component LuxR family transcriptional regulator  34.57 
 
 
215 aa  87.8  1e-16  Opitutus terrae PB90-1  Bacteria  normal  0.0678517  normal 
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  33.91 
 
 
214 aa  87.8  1e-16  Burkholderia ambifaria MC40-6  Bacteria  normal  hitchhiker  0.00509748 
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  35.91 
 
 
216 aa  87.8  1e-16  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  35.71 
 
 
214 aa  87.4  1e-16  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  33.91 
 
 
214 aa  87.4  1e-16  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0203352 
 
 
-
 
NC_010658  SbBS512_E2738  DNA-binding transcriptional activator EvgA  26.17 
 
 
204 aa  87.4  1e-16  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_02279  DNA-binding response regulator in two-component regulatory system with EvgS  26.17 
 
 
204 aa  87.4  2e-16  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1288  two component transcriptional regulator, LuxR family  26.17 
 
 
204 aa  87.4  2e-16  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  32.67 
 
 
215 aa  87  2e-16  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_3600  DNA-binding transcriptional activator EvgA  26.17 
 
 
204 aa  87.4  2e-16  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.0441797 
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  32.67 
 
 
215 aa  87  2e-16  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0026  two component LuxR family transcriptional regulator  33.91 
 
 
214 aa  87  2e-16  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  32.67 
 
 
215 aa  86.7  2e-16  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1300  DNA-binding transcriptional activator EvgA  26.17 
 
 
204 aa  87.4  2e-16  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1850  two component LuxR family transcriptional regulator  31.92 
 
 
216 aa  87.4  2e-16  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A2506  DNA-binding transcriptional activator EvgA  26.17 
 
 
204 aa  87.4  2e-16  Escherichia coli HS  Bacteria  hitchhiker  0.00265649  n/a   
 
 
-
 
NC_012892  B21_02240  hypothetical protein  26.17 
 
 
204 aa  87.4  2e-16  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  32.67 
 
 
215 aa  87  2e-16  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  32.67 
 
 
215 aa  87  2e-16  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  32.67 
 
 
215 aa  87  2e-16  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
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