More than 300 homologs were found in PanDaTox collection
for query gene Rcas_1156 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009767  Rcas_1156  short-chain dehydrogenase/reductase SDR  100 
 
 
269 aa  527  1e-149  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0388  short-chain dehydrogenase/reductase SDR  84.85 
 
 
269 aa  431  1e-120  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.14599 
 
 
-
 
NC_013093  Amir_0035  short-chain dehydrogenase/reductase SDR  48.03 
 
 
255 aa  216  2e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2257  short-chain dehydrogenase/reductase SDR  42.21 
 
 
267 aa  192  4e-48  Meiothermus ruber DSM 1279  Bacteria  normal  0.229091  hitchhiker  0.0024535 
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  34.17 
 
 
264 aa  151  1e-35  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_007969  Pcryo_1079  short-chain dehydrogenase/reductase SDR  36.9 
 
 
295 aa  147  2.0000000000000003e-34  Psychrobacter cryohalolentis K5  Bacteria  normal  0.366872  normal  0.186845 
 
 
-
 
NC_007204  Psyc_1299  fatty acyl-CoA reductase protein  36.61 
 
 
295 aa  144  2e-33  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  33.86 
 
 
264 aa  141  9.999999999999999e-33  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  33.86 
 
 
264 aa  141  9.999999999999999e-33  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  33.86 
 
 
264 aa  141  9.999999999999999e-33  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  33.86 
 
 
264 aa  140  1.9999999999999998e-32  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  33.86 
 
 
264 aa  140  1.9999999999999998e-32  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  33.46 
 
 
264 aa  140  1.9999999999999998e-32  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  33.86 
 
 
264 aa  139  4.999999999999999e-32  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  33.86 
 
 
264 aa  139  4.999999999999999e-32  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  32.68 
 
 
264 aa  135  7.000000000000001e-31  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0194  short-chain dehydrogenase/reductase SDR  44.15 
 
 
233 aa  135  8e-31  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  33.07 
 
 
264 aa  134  9.999999999999999e-31  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  32.68 
 
 
264 aa  133  3.9999999999999996e-30  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_2713  short-chain dehydrogenase/reductase SDR  32.92 
 
 
266 aa  132  9e-30  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3908  short-chain dehydrogenase/reductase SDR  37.45 
 
 
272 aa  131  1.0000000000000001e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.106718  normal  0.186536 
 
 
-
 
NC_010571  Oter_1569  short-chain dehydrogenase/reductase SDR  41.85 
 
 
248 aa  130  2.0000000000000002e-29  Opitutus terrae PB90-1  Bacteria  normal  0.31881  normal  0.311726 
 
 
-
 
NC_009719  Plav_0391  short-chain dehydrogenase/reductase SDR  33.2 
 
 
279 aa  129  5.0000000000000004e-29  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.319463  normal 
 
 
-
 
NC_009675  Anae109_0032  short-chain dehydrogenase/reductase SDR  35.43 
 
 
342 aa  127  2.0000000000000002e-28  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.891974  normal 
 
 
-
 
NC_009972  Haur_1067  short-chain dehydrogenase/reductase SDR  31.89 
 
 
258 aa  127  2.0000000000000002e-28  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0353  short-chain dehydrogenase/reductase SDR  34.14 
 
 
262 aa  126  4.0000000000000003e-28  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008148  Rxyl_2457  short-chain dehydrogenase/reductase SDR  33.82 
 
 
291 aa  124  1e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0300911  n/a   
 
 
-
 
NC_008254  Meso_3685  short chain dehydrogenase  35.94 
 
 
346 aa  125  1e-27  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4061  short chain dehydrogenase  35.66 
 
 
337 aa  121  9.999999999999999e-27  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11068  oxidoreductase  35.71 
 
 
301 aa  121  9.999999999999999e-27  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.205536 
 
 
-
 
NC_009767  Rcas_3727  short-chain dehydrogenase/reductase SDR  41.13 
 
 
258 aa  121  9.999999999999999e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.358068  hitchhiker  0.00171141 
 
 
-
 
NC_013595  Sros_8706  short-chain dehydrogenase/reductase SDR  39 
 
 
255 aa  120  3e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_3453  short-chain dehydrogenase/reductase SDR  29.84 
 
 
267 aa  120  3e-26  Trichodesmium erythraeum IMS101  Bacteria  normal  0.282255  normal 
 
 
-
 
NC_010087  Bmul_5503  short chain dehydrogenase  36.64 
 
 
327 aa  119  4.9999999999999996e-26  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.148603  normal  0.0783647 
 
 
-
 
NC_009524  PsycPRwf_1379  short-chain dehydrogenase/reductase SDR  31.75 
 
 
292 aa  119  4.9999999999999996e-26  Psychrobacter sp. PRwf-1  Bacteria  normal  0.0182353  hitchhiker  0.000251864 
 
 
-
 
NC_007760  Adeh_0031  short-chain dehydrogenase/reductase SDR  34.77 
 
 
340 aa  119  6e-26  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1704  short-chain dehydrogenase/reductase SDR  34.48 
 
 
327 aa  119  6e-26  Methylobacterium sp. 4-46  Bacteria  normal  0.151565  normal 
 
 
-
 
NC_010117  COXBURSA331_A1696  short chain dehydrogenase/reductase family oxidoreductase  34.55 
 
 
258 aa  119  7e-26  Coxiella burnetii RSA 331  Bacteria  normal  0.817291  n/a   
 
 
-
 
NC_009668  Oant_2951  short chain dehydrogenase  31.99 
 
 
276 aa  118  7.999999999999999e-26  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_0471  short chain dehydrogenase  34.55 
 
 
258 aa  118  9e-26  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_0205  short-chain dehydrogenase/reductase SDR  36.09 
 
 
257 aa  118  9e-26  Trichodesmium erythraeum IMS101  Bacteria  normal  0.76225  normal  0.242071 
 
 
-
 
NC_007484  Noc_0472  short chain dehydrogenase  34.6 
 
 
328 aa  118  9.999999999999999e-26  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3066  short-chain dehydrogenase/reductase SDR  34.24 
 
 
273 aa  118  9.999999999999999e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.172953  normal 
 
 
-
 
NC_009654  Mmwyl1_4482  short-chain dehydrogenase/reductase SDR  34.9 
 
 
244 aa  117  9.999999999999999e-26  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.00000000123251 
 
 
-
 
NC_013235  Namu_3688  short chain dehydrogenase  35.66 
 
 
335 aa  118  9.999999999999999e-26  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000592094  normal  0.0665627 
 
 
-
 
NC_010172  Mext_1019  short-chain dehydrogenase/reductase SDR  36.74 
 
 
330 aa  117  1.9999999999999998e-25  Methylobacterium extorquens PA1  Bacteria  normal  0.0961773  normal 
 
 
-
 
NC_008532  STER_1192  oxidoreductase, short chain dehydrogenase/reductase family  29.3 
 
 
255 aa  117  1.9999999999999998e-25  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0159  short-chain dehydrogenase/reductase SDR  36.18 
 
 
249 aa  115  5e-25  Caulobacter sp. K31  Bacteria  normal  0.410897  normal  0.168063 
 
 
-
 
NC_007348  Reut_B4439  short chain dehydrogenase  38.16 
 
 
336 aa  116  5e-25  Ralstonia eutropha JMP134  Bacteria  normal  0.0197504  n/a   
 
 
-
 
NC_008025  Dgeo_0458  short-chain dehydrogenase/reductase SDR  33.59 
 
 
257 aa  116  5e-25  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.706164 
 
 
-
 
NC_011757  Mchl_0767  short-chain dehydrogenase/reductase SDR  36.36 
 
 
330 aa  116  5e-25  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.415615 
 
 
-
 
NC_013501  Rmar_0154  short-chain dehydrogenase/reductase SDR  35.11 
 
 
261 aa  115  6e-25  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1337  3-ketoacyl-(acyl-carrier-protein) reductase  32.63 
 
 
238 aa  115  7.999999999999999e-25  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.541378  normal 
 
 
-
 
NC_007347  Reut_A1414  short chain dehydrogenase  35.16 
 
 
270 aa  114  1.0000000000000001e-24  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2194  short-chain dehydrogenase/reductase SDR  30 
 
 
280 aa  115  1.0000000000000001e-24  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0155651  n/a   
 
 
-
 
NC_013730  Slin_1686  short-chain dehydrogenase/reductase SDR  30.97 
 
 
269 aa  114  2.0000000000000002e-24  Spirosoma linguale DSM 74  Bacteria  normal  0.292744  normal 
 
 
-
 
NC_007005  Psyr_0194  Short-chain dehydrogenase/reductase SDR  37.37 
 
 
244 aa  114  2.0000000000000002e-24  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_1171  short-chain dehydrogenase/reductase SDR  34.85 
 
 
238 aa  114  2.0000000000000002e-24  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.399765 
 
 
-
 
NC_009523  RoseRS_3239  short-chain dehydrogenase/reductase SDR  39.11 
 
 
258 aa  113  3e-24  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.703839 
 
 
-
 
NC_007760  Adeh_2306  short-chain dehydrogenase/reductase SDR  34.08 
 
 
286 aa  113  3e-24  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.930868  n/a   
 
 
-
 
NC_011884  Cyan7425_0579  short chain dehydrogenase  30 
 
 
336 aa  113  3e-24  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6571  short chain dehydrogenase  36.88 
 
 
327 aa  113  3e-24  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_1087  short-chain dehydrogenase/reductase SDR  34.14 
 
 
286 aa  112  5e-24  Acidiphilium cryptum JF-5  Bacteria  normal  0.252629  n/a   
 
 
-
 
NC_007959  Nham_4176  short chain dehydrogenase  35.78 
 
 
331 aa  112  7.000000000000001e-24  Nitrobacter hamburgensis X14  Bacteria  normal  0.333846  n/a   
 
 
-
 
NC_007492  Pfl01_2470  Short-chain dehydrogenase/reductase SDR  33.62 
 
 
244 aa  112  8.000000000000001e-24  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3728  short-chain dehydrogenase/reductase SDR  33.5 
 
 
241 aa  112  8.000000000000001e-24  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2262  short-chain dehydrogenase/reductase SDR  32.74 
 
 
244 aa  112  8.000000000000001e-24  Candidatus Koribacter versatilis Ellin345  Bacteria  hitchhiker  0.0000989308  normal 
 
 
-
 
NC_009565  TBFG_11576  fatty acyl-CoA reductase  38.1 
 
 
341 aa  111  1.0000000000000001e-23  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_3599  short-chain dehydrogenase/reductase SDR  32.29 
 
 
256 aa  111  1.0000000000000001e-23  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_2990  short-chain dehydrogenase/reductase SDR  29.07 
 
 
336 aa  111  1.0000000000000001e-23  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.753592 
 
 
-
 
NC_013730  Slin_4558  short-chain dehydrogenase/reductase SDR  32.99 
 
 
240 aa  111  1.0000000000000001e-23  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00293136  normal 
 
 
-
 
NC_008463  PA14_44570  putative short-chain dehydrogenase  29.59 
 
 
295 aa  111  1.0000000000000001e-23  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.30545 
 
 
-
 
NC_011726  PCC8801_0911  short chain dehydrogenase  36.22 
 
 
242 aa  111  1.0000000000000001e-23  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_2271  short-chain dehydrogenase/reductase SDR  29.64 
 
 
262 aa  110  2.0000000000000002e-23  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_3013  short-chain dehydrogenase/reductase SDR  29.48 
 
 
296 aa  110  2.0000000000000002e-23  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0938  short chain dehydrogenase  36.22 
 
 
242 aa  110  2.0000000000000002e-23  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_0046  short-chain dehydrogenase/reductase SDR  33.2 
 
 
340 aa  110  2.0000000000000002e-23  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  29.8 
 
 
261 aa  110  2.0000000000000002e-23  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_012848  Rleg_4853  short-chain dehydrogenase/reductase SDR  34.54 
 
 
248 aa  110  2.0000000000000002e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.154391  normal  0.241568 
 
 
-
 
NC_008009  Acid345_0726  short-chain dehydrogenase/reductase SDR  30.04 
 
 
366 aa  110  2.0000000000000002e-23  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.642345  normal 
 
 
-
 
NC_011894  Mnod_0481  short-chain dehydrogenase/reductase SDR  37.07 
 
 
328 aa  110  2.0000000000000002e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3360  short-chain dehydrogenase/reductase SDR  29.48 
 
 
296 aa  110  2.0000000000000002e-23  Ralstonia pickettii 12J  Bacteria  normal  0.0880635  normal 
 
 
-
 
NC_011145  AnaeK_0034  short-chain dehydrogenase/reductase SDR  33.2 
 
 
340 aa  110  2.0000000000000002e-23  Anaeromyxobacter sp. K  Bacteria  normal  0.0147442  n/a   
 
 
-
 
NC_011894  Mnod_7667  short-chain dehydrogenase/reductase SDR  32.54 
 
 
332 aa  110  2.0000000000000002e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.755346  n/a   
 
 
-
 
NC_009439  Pmen_2621  short-chain dehydrogenase/reductase SDR  29.93 
 
 
295 aa  110  2.0000000000000002e-23  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.786359 
 
 
-
 
NC_010557  BamMC406_6285  short chain dehydrogenase  36.64 
 
 
327 aa  110  2.0000000000000002e-23  Burkholderia ambifaria MC40-6  Bacteria  normal  0.306501  hitchhiker  0.00902289 
 
 
-
 
NC_007347  Reut_A0130  short chain dehydrogenase  33.86 
 
 
265 aa  110  3e-23  Ralstonia eutropha JMP134  Bacteria  normal  0.727225  n/a   
 
 
-
 
NC_007413  Ava_0943  Short-chain dehydrogenase/reductase SDR  31.4 
 
 
293 aa  110  3e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3968  short chain dehydrogenase  32.28 
 
 
269 aa  110  3e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0231224  normal  0.018096 
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  32.82 
 
 
281 aa  110  3e-23  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3796  putative short-chain dehydrogenase  28.84 
 
 
295 aa  110  3e-23  Pseudomonas aeruginosa PA7  Bacteria  normal  0.205058  n/a   
 
 
-
 
NC_010725  Mpop_1331  short-chain dehydrogenase/reductase SDR  36.02 
 
 
332 aa  110  3e-23  Methylobacterium populi BJ001  Bacteria  normal  0.261589  normal  0.281891 
 
 
-
 
NC_013131  Caci_6413  short-chain dehydrogenase/reductase SDR  32.95 
 
 
255 aa  109  4.0000000000000004e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0597317 
 
 
-
 
NC_009485  BBta_3170  putative Short-chain dehydrogenase/reductase  35.91 
 
 
544 aa  109  4.0000000000000004e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0745281 
 
 
-
 
NC_008146  Mmcs_1552  short-chain dehydrogenase/reductase SDR  39.47 
 
 
246 aa  109  4.0000000000000004e-23  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1232  short-chain dehydrogenase/reductase SDR  41.3 
 
 
305 aa  109  4.0000000000000004e-23  Nocardioides sp. JS614  Bacteria  normal  0.623354  n/a   
 
 
-
 
NC_008705  Mkms_1575  short-chain dehydrogenase/reductase SDR  39.47 
 
 
246 aa  109  4.0000000000000004e-23  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_0733  short-chain dehydrogenase/reductase SDR  32.29 
 
 
243 aa  109  5e-23  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1650  short-chain dehydrogenase/reductase SDR  35.16 
 
 
254 aa  109  6e-23  Cyanothece sp. PCC 7425  Bacteria  normal  0.206138  normal 
 
 
-
 
NC_007948  Bpro_3168  short chain dehydrogenase  35.58 
 
 
270 aa  108  7.000000000000001e-23  Polaromonas sp. JS666  Bacteria  normal  0.273274  normal  0.685188 
 
 
-
 
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