26 homologs were found in PanDaTox collection
for query gene RSP_4008 on replicon NC_007488
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007488  RSP_4008  trimethylamine methyltransferase MttB-like protein  100 
 
 
517 aa  1070    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_1775  trimethylamine methyltransferase  45.32 
 
 
523 aa  451  1e-125  Sinorhizobium medicae WSM419  Bacteria  normal  0.445746  normal  0.0169643 
 
 
-
 
NC_007493  RSP_2813  putative trimethylamine methyltransferase protein  42.83 
 
 
513 aa  434  1e-120  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.94532  n/a   
 
 
-
 
NC_009049  Rsph17029_1485  trimethylamine methyltransferase  42.83 
 
 
513 aa  434  1e-120  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.355063 
 
 
-
 
NC_008044  TM1040_1374  trimethylamine methyltransferase  43.72 
 
 
514 aa  425  1e-118  Ruegeria sp. TM1040  Bacteria  normal  0.181279  normal  0.561281 
 
 
-
 
NC_009428  Rsph17025_1716  trimethylamine methyltransferase  42.24 
 
 
513 aa  424  1e-117  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1586  trimethylamine methyltransferase  43.15 
 
 
515 aa  418  9.999999999999999e-116  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.091176 
 
 
-
 
NC_007802  Jann_2223  trimethylamine methyltransferase  41.63 
 
 
519 aa  398  1e-109  Jannaschia sp. CCS1  Bacteria  normal  0.0727835  normal 
 
 
-
 
NC_009636  Smed_0432  trimethylamine methyltransferase  41.13 
 
 
514 aa  397  1e-109  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.57949 
 
 
-
 
NC_011830  Dhaf_4326  trimethylamine methyltransferase  38.45 
 
 
476 aa  340  5e-92  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1728  trimethylamine methyltransferase  34.2 
 
 
468 aa  292  9e-78  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_2171  trimethylamine methyltransferase  36.31 
 
 
519 aa  291  2e-77  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3128  trimethylamine methyltransferase  37.5 
 
 
519 aa  290  4e-77  Jannaschia sp. CCS1  Bacteria  normal  normal  0.186988 
 
 
-
 
NC_009621  Smed_5110  trimethylamine methyltransferase  36.27 
 
 
511 aa  288  1e-76  Sinorhizobium medicae WSM419  Bacteria  normal  0.148591  normal  0.0268 
 
 
-
 
NC_009952  Dshi_2817  trimethylamine methyltransferase  35.55 
 
 
519 aa  283  6.000000000000001e-75  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.322933 
 
 
-
 
NC_011830  Dhaf_1730  trimethylamine methyltransferase  29.39 
 
 
476 aa  222  9.999999999999999e-57  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_1480  trimethylamine methyltransferase  31.58 
 
 
504 aa  213  5.999999999999999e-54  Jannaschia sp. CCS1  Bacteria  normal  0.246816  normal 
 
 
-
 
NC_011830  Dhaf_4870  trimethylamine methyltransferase  30.09 
 
 
471 aa  206  1e-51  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1111  trimethylamine methyltransferase  26.91 
 
 
477 aa  144  4e-33  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2196  trimethylamine methyltransferase  26.49 
 
 
515 aa  140  4.999999999999999e-32  Sinorhizobium medicae WSM419  Bacteria  normal  0.726169  normal  0.0249969 
 
 
-
 
NC_008698  Tpen_1467  trimethylamine methyltransferase  26.64 
 
 
475 aa  129  1.0000000000000001e-28  Thermofilum pendens Hrk 5  Archaea  normal  0.657417  n/a   
 
 
-
 
NC_007955  Mbur_2313  trimethylamine:corrinoid methyltransferase  22.37 
 
 
484 aa  117  6e-25  Methanococcoides burtonii DSM 6242  Archaea  normal  0.0209756  n/a   
 
 
-
 
NC_007802  Jann_1601  trimethylamine methyltransferase  23.34 
 
 
510 aa  111  3e-23  Jannaschia sp. CCS1  Bacteria  normal  0.38036  normal  0.479948 
 
 
-
 
NC_007955  Mbur_2308  trimethylamine:corrinoid methyltransferase  21.79 
 
 
334 aa  67  0.0000000007  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.0038557  n/a   
 
 
-
 
NC_007955  Mbur_2309  trimethylamine:corrinoid methyltransferase  28.68 
 
 
147 aa  65.5  0.000000002  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.00021948  n/a   
 
 
-
 
NC_009943  Dole_1109  trimethylamine:corrinoid methyltransferase-like protein  21.97 
 
 
410 aa  50.1  0.0001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
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