11 homologs were found in PanDaTox collection
for query gene RSP_3908 on replicon NC_009007
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009007  RSP_3908  hypothetical protein  100 
 
 
185 aa  370  1e-102  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007490  RSP_4251  hypothetical protein  99.46 
 
 
185 aa  369  1e-101  Rhodobacter sphaeroides 2.4.1  Bacteria  hitchhiker  0.00586984  n/a   
 
 
-
 
NC_007802  Jann_3331  hypothetical protein  46.61 
 
 
165 aa  90.9  9e-18  Jannaschia sp. CCS1  Bacteria  normal  0.090397  normal  0.411304 
 
 
-
 
NC_011365  Gdia_1612  hypothetical protein  34.38 
 
 
204 aa  60.8  0.000000009  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.842524  normal 
 
 
-
 
NC_010335  Caul_5231  hypothetical protein  36.5 
 
 
364 aa  57  0.0000002  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0873  hypothetical protein  35.48 
 
 
100 aa  48.1  0.00007  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.104334  normal  0.889939 
 
 
-
 
NC_012791  Vapar_2853  putative signal peptide  30.47 
 
 
161 aa  47.8  0.0001  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3054  hypothetical protein  24.71 
 
 
192 aa  45.8  0.0003  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_1008  hypothetical protein  24.56 
 
 
204 aa  46.2  0.0003  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.00000903555  n/a   
 
 
-
 
NC_014150  Bmur_1007  hypothetical protein  22.69 
 
 
210 aa  43.9  0.001  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.000000127296  n/a   
 
 
-
 
NC_013526  Tter_2432  DNA topoisomerase type IA zn finger domain protein  36.26 
 
 
206 aa  42.4  0.004  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
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