8 homologs were found in PanDaTox collection
for query gene RSP_3877 on replicon NC_009007
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009007  RSP_3877  glycoside hydrolase family protein  100 
 
 
286 aa  566  1e-160  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009040  Rsph17029_4163  hypothetical protein  99.65 
 
 
286 aa  565  1e-160  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.134086  normal  0.159805 
 
 
-
 
NC_009049  Rsph17029_0621  glycoside hydrolase family protein  68.27 
 
 
311 aa  404  1.0000000000000001e-112  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.52498  normal 
 
 
-
 
NC_009050  Rsph17029_3341  hypothetical protein  53.52 
 
 
296 aa  261  8e-69  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.560576  normal  0.0256438 
 
 
-
 
NC_009428  Rsph17025_2424  glycoside hydrolase family protein  29.31 
 
 
467 aa  53.1  0.000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.443188 
 
 
-
 
NC_007493  RSP_0513  hypothetical protein  29.71 
 
 
475 aa  50.1  0.00004  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2165  glycoside hydrolase family protein  29.71 
 
 
475 aa  49.7  0.00005  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.669505  normal  0.045019 
 
 
-
 
NC_013441  Gbro_4150  glycoside hydrolase family 16  31.71 
 
 
269 aa  42.7  0.006  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
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