9 homologs were found in PanDaTox collection
for query gene RSP_3768 on replicon NC_007494
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007494  RSP_3768  hypothetical protein  100 
 
 
120 aa  243  6e-64  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.42347  n/a   
 
 
-
 
NC_011989  Avi_2357  hypothetical protein  44.55 
 
 
132 aa  98.6  3e-20  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_1302  hypothetical protein  44.55 
 
 
110 aa  94.4  5e-19  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_3890  hypothetical protein  32.74 
 
 
111 aa  62  0.000000003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0832551  normal  0.849345 
 
 
-
 
NC_008254  Meso_1247  hypothetical protein  37.5 
 
 
116 aa  61.2  0.000000005  Chelativorans sp. BNC1  Bacteria  decreased coverage  0.0000087542  n/a   
 
 
-
 
NC_009952  Dshi_1483  hypothetical protein  39.76 
 
 
122 aa  58.9  0.00000002  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0133258  normal  0.267812 
 
 
-
 
NC_008687  Pden_3084  putative lipoprotein  33.04 
 
 
122 aa  54.3  0.0000005  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.173614 
 
 
-
 
NC_007406  Nwi_1490  putative lipoprotein  29.46 
 
 
123 aa  43.1  0.001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0750895  normal  0.286576 
 
 
-
 
NC_010505  Mrad2831_3300  putative lipoprotein  29.57 
 
 
126 aa  41.6  0.004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.346926  normal 
 
 
-
 
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