13 homologs were found in PanDaTox collection
for query gene RSP_2057 on replicon NC_007493
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007493  RSP_1633  hypothetical protein  95.55 
 
 
494 aa  917    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.235606  n/a   
 
 
-
 
NC_007493  RSP_2057  hypothetical protein  100 
 
 
494 aa  979    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3764  hypothetical protein  93.32 
 
 
494 aa  928    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.34695  n/a   
 
 
-
 
NC_009050  Rsph17029_3330  hypothetical protein  93.32 
 
 
494 aa  925    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0254985 
 
 
-
 
NC_009050  Rsph17029_3370  hypothetical protein  94.74 
 
 
494 aa  913    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3629  hypothetical protein  94.46 
 
 
271 aa  526  1e-148  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_1639  hypothetical protein  38.3 
 
 
374 aa  70.1  0.00000000008  Sinorhizobium medicae WSM419  Bacteria  normal  0.640839  normal  0.175401 
 
 
-
 
NC_009636  Smed_1872  hypothetical protein  38.3 
 
 
374 aa  70.1  0.00000000008  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.573397 
 
 
-
 
NC_009656  PSPA7_0787  tail fiber protein  32.2 
 
 
349 aa  58.5  0.0000003  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_08310  hypothetical protein  31.93 
 
 
350 aa  55.1  0.000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.000000000314349  hitchhiker  0.0000557295 
 
 
-
 
NC_009007  RSP_3921  hypothetical protein  32.32 
 
 
433 aa  54.3  0.000005  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009040  Rsph17029_4090  hypothetical protein  32.32 
 
 
433 aa  54.3  0.000005  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.150292 
 
 
-
 
NC_007005  Psyr_2770  tail fiber domain-containing protein  41.07 
 
 
367 aa  46.2  0.001  Pseudomonas syringae pv. syringae B728a  Bacteria  decreased coverage  0.00369502  normal  0.0266249 
 
 
-
 
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