9 homologs were found in PanDaTox collection
for query gene RSP_1122 on replicon NC_007493
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007493  RSP_1122  hypothetical protein  100 
 
 
195 aa  379  1e-104  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2784  hypothetical protein  97.44 
 
 
195 aa  330  7.000000000000001e-90  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.188398 
 
 
-
 
NC_010172  Mext_2423  glycosyltransferase  35.92 
 
 
537 aa  52.8  0.000003  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.848309 
 
 
-
 
NC_009620  Smed_4707  putative membrane-anchored protein  32.41 
 
 
235 aa  51.6  0.000006  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.617832 
 
 
-
 
NC_013037  Dfer_0049  hypothetical protein  36.78 
 
 
1449 aa  50.4  0.00002  Dyadobacter fermentans DSM 18053  Bacteria  decreased coverage  0.0000651101  normal  0.0482632 
 
 
-
 
NC_011894  Mnod_2061  glycosyltransferase  29.66 
 
 
537 aa  49.3  0.00003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_5645  hypothetical protein  32.22 
 
 
227 aa  48.1  0.00008  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0214795  normal  0.245514 
 
 
-
 
NC_010505  Mrad2831_5751  hypothetical protein  34.41 
 
 
363 aa  46.2  0.0003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.357131  normal 
 
 
-
 
NC_008312  Tery_1492  glycosyl transferase family protein  25.47 
 
 
1737 aa  41.2  0.01  Trichodesmium erythraeum IMS101  Bacteria  normal  0.315595  normal  0.552274 
 
 
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