16 homologs were found in PanDaTox collection
for query gene RSP_0775 on replicon NC_007493
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007493  RSP_0775  class I monoheme cytochrome c  100 
 
 
139 aa  282  1.0000000000000001e-75  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2431  class I monoheme cytochrome c  96.9 
 
 
129 aa  254  4e-67  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0928963  normal  0.0529755 
 
 
-
 
NC_009428  Rsph17025_0404  hypothetical protein  86.82 
 
 
129 aa  227  4e-59  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_4164  hypothetical protein  37.07 
 
 
147 aa  67.8  0.00000000005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.277093  normal  0.230717 
 
 
-
 
NC_009952  Dshi_2694  putative cytochrome c family protein  37.04 
 
 
133 aa  63.9  0.0000000006  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.97531  normal 
 
 
-
 
NC_009428  Rsph17025_1186  hypothetical protein  36.44 
 
 
127 aa  62.4  0.000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.222804  normal  0.801183 
 
 
-
 
NC_007908  Rfer_0393  hypothetical protein  34.65 
 
 
136 aa  58.2  0.00000003  Rhodoferax ferrireducens T118  Bacteria  normal  0.789834  n/a   
 
 
-
 
NC_009475  BBta_p0081  hypothetical protein  40.28 
 
 
149 aa  55.8  0.0000002  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal  0.824718 
 
 
-
 
NC_007971  Rmet_6106  putative cytochrome protein CopT  41.98 
 
 
254 aa  51.2  0.000004  Cupriavidus metallidurans CH34  Bacteria  normal  0.484622  normal  0.0345591 
 
 
-
 
NC_008009  Acid345_0435  hypothetical protein  48.57 
 
 
314 aa  42.7  0.002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0471891 
 
 
-
 
NC_007614  Nmul_A2320  cytochrome c, class I  35.8 
 
 
702 aa  40.8  0.006  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A2760  cytochrome c, class I  35.8 
 
 
702 aa  40.8  0.006  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_009475  BBta_p0070  putative cytochrome c class I protein  33.33 
 
 
199 aa  40.8  0.007  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal  0.327353 
 
 
-
 
NC_008639  Cpha266_0148  cytochrome c, class I  47.17 
 
 
248 aa  40.4  0.008  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2353  permease  48.98 
 
 
653 aa  40.4  0.008  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1103  putative cytochrome c class I protein  31.13 
 
 
181 aa  40  0.01  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
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