More than 300 homologs were found in PanDaTox collection
for query gene RPD_4383 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_5284  acyl-CoA dehydrogenase domain protein  85.75 
 
 
379 aa  643    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.245175  n/a   
 
 
-
 
NC_007778  RPB_4674  Acyl-CoA dehydrogenase-like  88.39 
 
 
379 aa  673    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4383  acyl-CoA dehydrogenase-like  100 
 
 
379 aa  761    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0703  putative acyl-CoA dehydrogenase  76.78 
 
 
379 aa  574  1.0000000000000001e-163  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_1653  acyl-CoA dehydrogenase domain-containing protein  57.78 
 
 
379 aa  448  1e-125  Maricaulis maris MCS10  Bacteria  normal  normal  0.257956 
 
 
-
 
NC_008048  Sala_3078  acyl-CoA dehydrogenase-like protein  55.15 
 
 
372 aa  412  1e-114  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4575  acyl-CoA dehydrogenase-like protein  54.19 
 
 
379 aa  401  9.999999999999999e-111  Cupriavidus metallidurans CH34  Bacteria  normal  0.0903077  normal  0.010992 
 
 
-
 
NC_007794  Saro_1000  acyl-CoA dehydrogenase-like  53.68 
 
 
379 aa  390  1e-107  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.933298  n/a   
 
 
-
 
NC_010338  Caul_1445  acyl-CoA dehydrogenase domain-containing protein  55.26 
 
 
377 aa  385  1e-106  Caulobacter sp. K31  Bacteria  normal  0.837233  normal  0.259915 
 
 
-
 
NC_009719  Plav_2204  acyl-CoA dehydrogenase domain-containing protein  49.87 
 
 
379 aa  387  1e-106  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.0189633  normal 
 
 
-
 
NC_007778  RPB_1750  Acyl-CoA dehydrogenase-like  40.05 
 
 
380 aa  255  7e-67  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0168825 
 
 
-
 
NC_007958  RPD_3549  acyl-CoA dehydrogenase-like  39.79 
 
 
380 aa  254  2.0000000000000002e-66  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7070  putative pimeloyl-CoA dehydrogenase pimD (small subunit)  40.32 
 
 
380 aa  253  3e-66  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.562071  normal  0.731705 
 
 
-
 
NC_011004  Rpal_4234  pimeloyl-CoA dehydrogenase, small subunit  38.2 
 
 
380 aa  238  1e-61  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2230  acyl-CoA dehydrogenase-like  38.03 
 
 
380 aa  236  4e-61  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0715641  normal  0.106969 
 
 
-
 
NC_010512  Bcenmc03_6857  acyl-CoA dehydrogenase domain-containing protein  39.68 
 
 
377 aa  232  9e-60  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.728752 
 
 
-
 
NC_010512  Bcenmc03_6833  acyl-CoA dehydrogenase domain-containing protein  36.44 
 
 
386 aa  231  1e-59  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.508275  normal 
 
 
-
 
NC_009901  Spea_2144  acyl-CoA dehydrogenase domain-containing protein  35.68 
 
 
401 aa  230  2e-59  Shewanella pealeana ATCC 700345  Bacteria  normal  0.511433  n/a   
 
 
-
 
NC_008228  Patl_0106  acyl-CoA dehydrogenase-like  36.1 
 
 
379 aa  231  2e-59  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.856093  n/a   
 
 
-
 
NC_009484  Acry_0252  acyl-CoA dehydrogenase domain-containing protein  39.89 
 
 
372 aa  227  2e-58  Acidiphilium cryptum JF-5  Bacteria  normal  0.318159  n/a   
 
 
-
 
NC_010084  Bmul_0426  acyl-CoA dehydrogenase domain-containing protein  40.21 
 
 
378 aa  224  2e-57  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2198  Acyl-CoA dehydrogenase-like  36.65 
 
 
378 aa  222  9e-57  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000000106559  hitchhiker  0.00491627 
 
 
-
 
NC_007348  Reut_B3534  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  36.87 
 
 
377 aa  221  1.9999999999999999e-56  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_1061  acyl-CoA dehydrogenase domain-containing protein  39.79 
 
 
384 aa  220  3e-56  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6852  acyl-CoA dehydrogenase domain-containing protein  39.95 
 
 
384 aa  218  2e-55  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0232  acyl-CoA dehydrogenase domain-containing protein  39.63 
 
 
382 aa  218  2e-55  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0506844 
 
 
-
 
NC_009719  Plav_1061  acyl-CoA dehydrogenase domain-containing protein  35.9 
 
 
376 aa  215  9.999999999999999e-55  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2592  acyl-CoA dehydrogenase-like  40 
 
 
381 aa  213  3.9999999999999995e-54  Rhodoferax ferrireducens T118  Bacteria  normal  0.144332  n/a   
 
 
-
 
NC_012791  Vapar_0841  acyl-CoA dehydrogenase domain protein  39.84 
 
 
380 aa  213  3.9999999999999995e-54  Variovorax paradoxus S110  Bacteria  normal  0.0273673  n/a   
 
 
-
 
NC_009901  Spea_2175  acyl-CoA dehydrogenase domain-containing protein  35.26 
 
 
401 aa  212  7e-54  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5440  acyl-CoA dehydrogenase domain protein  39.1 
 
 
382 aa  210  3e-53  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0415811  n/a   
 
 
-
 
NC_007958  RPD_3606  acyl-CoA dehydrogenase-like  36.63 
 
 
375 aa  210  4e-53  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.343356  normal 
 
 
-
 
NC_010338  Caul_2049  acyl-CoA dehydrogenase domain-containing protein  36 
 
 
385 aa  209  7e-53  Caulobacter sp. K31  Bacteria  normal  0.0167524  normal 
 
 
-
 
NC_010681  Bphyt_2738  acyl-CoA dehydrogenase domain protein  37.7 
 
 
375 aa  208  1e-52  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1389  acyl-CoA dehydrogenase  37.5 
 
 
376 aa  207  2e-52  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.322148 
 
 
-
 
NC_008782  Ajs_3736  acyl-CoA dehydrogenase domain-containing protein  37.4 
 
 
376 aa  208  2e-52  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6882  acyl-CoA dehydrogenase domain-containing protein  34.3 
 
 
380 aa  207  3e-52  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5148  putative acyl-CoA dehydrogenase, pimD-like protein  37.17 
 
 
376 aa  206  4e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.210774  normal  0.0144786 
 
 
-
 
NC_007958  RPD_4006  acyl-CoA dehydrogenase-like  36.34 
 
 
380 aa  206  5e-52  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.294245  normal  0.950138 
 
 
-
 
NC_009485  BBta_7118  putative acyl-CoA dehydrogenase  36.1 
 
 
375 aa  206  6e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.695854 
 
 
-
 
NC_009511  Swit_0318  acyl-CoA dehydrogenase domain-containing protein  39.89 
 
 
376 aa  204  2e-51  Sphingomonas wittichii RW1  Bacteria  normal  0.318022  normal 
 
 
-
 
NC_008786  Veis_4957  acyl-CoA dehydrogenase domain-containing protein  35.9 
 
 
378 aa  204  2e-51  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1430  acyl-CoA dehydrogenase domain protein  35.81 
 
 
378 aa  204  2e-51  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2197  acyl-CoA dehydrogenase-like  35.9 
 
 
375 aa  204  3e-51  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1687  Acyl-CoA dehydrogenase-like  35.83 
 
 
375 aa  203  4e-51  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.473002  normal  0.801014 
 
 
-
 
NC_007974  Rmet_3728  putative acyl-CoA dehydrogenase  36.51 
 
 
381 aa  202  5e-51  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1239  Acyl-CoA dehydrogenase-like  35.81 
 
 
378 aa  201  1.9999999999999998e-50  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A6219  Acyl-CoA dehydrogenase  38.38 
 
 
378 aa  200  3e-50  Burkholderia sp. 383  Bacteria  normal  0.0215478  normal 
 
 
-
 
NC_008390  Bamb_2932  acyl-CoA dehydrogenase domain-containing protein  38.34 
 
 
381 aa  200  3.9999999999999996e-50  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2794  acyl-CoA dehydrogenase domain-containing protein  38.52 
 
 
381 aa  199  6e-50  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0554549  normal 
 
 
-
 
NC_008752  Aave_4312  acyl-CoA dehydrogenase domain-containing protein  36.36 
 
 
377 aa  199  7e-50  Acidovorax citrulli AAC00-1  Bacteria  normal  0.404578  normal  0.454435 
 
 
-
 
NC_009077  Mjls_1723  acyl-CoA dehydrogenase domain-containing protein  35.7 
 
 
380 aa  199  1.0000000000000001e-49  Mycobacterium sp. JLS  Bacteria  normal  0.0930374  normal 
 
 
-
 
NC_008146  Mmcs_1742  acyl-CoA dehydrogenase-like protein  35.17 
 
 
380 aa  198  1.0000000000000001e-49  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1789  acyl-CoA dehydrogenase domain-containing protein  35.17 
 
 
380 aa  198  1.0000000000000001e-49  Mycobacterium sp. KMS  Bacteria  normal  0.662681  normal 
 
 
-
 
NC_011992  Dtpsy_3017  acyl-CoA dehydrogenase domain protein  37.67 
 
 
376 aa  197  2.0000000000000003e-49  Acidovorax ebreus TPSY  Bacteria  normal  0.497113  n/a   
 
 
-
 
NC_007347  Reut_A0979  Acyl-CoA dehydrogenase, C-terminal  36.8 
 
 
372 aa  196  4.0000000000000005e-49  Ralstonia eutropha JMP134  Bacteria  normal  0.525022  n/a   
 
 
-
 
NC_007348  Reut_B4558  Acyl-CoA dehydrogenase, C-terminal  37.73 
 
 
360 aa  196  5.000000000000001e-49  Ralstonia eutropha JMP134  Bacteria  normal  0.126579  n/a   
 
 
-
 
NC_010002  Daci_1396  acyl-CoA dehydrogenase domain-containing protein  37.13 
 
 
378 aa  196  7e-49  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7145  Acyl-CoA dehydrogenase  37.6 
 
 
371 aa  195  1e-48  Burkholderia sp. 383  Bacteria  normal  0.237527  normal 
 
 
-
 
NC_011004  Rpal_1908  acyl-CoA dehydrogenase domain protein  36.1 
 
 
375 aa  195  1e-48  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.195445  n/a   
 
 
-
 
NC_008048  Sala_1105  acyl-CoA dehydrogenase-like protein  33.96 
 
 
379 aa  195  1e-48  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.492674  normal 
 
 
-
 
NC_007348  Reut_B4789  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  34.5 
 
 
375 aa  194  2e-48  Ralstonia eutropha JMP134  Bacteria  normal  0.227907  n/a   
 
 
-
 
NC_008699  Noca_3727  acyl-CoA dehydrogenase domain-containing protein  36.65 
 
 
378 aa  193  5e-48  Nocardioides sp. JS614  Bacteria  normal  0.0588386  n/a   
 
 
-
 
NC_008726  Mvan_1964  acyl-CoA dehydrogenase domain-containing protein  35.51 
 
 
380 aa  192  7e-48  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_009719  Plav_1873  acyl-CoA dehydrogenase domain-containing protein  34.25 
 
 
364 aa  191  2e-47  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.25852 
 
 
-
 
NC_009719  Plav_1031  acyl-CoA dehydrogenase domain-containing protein  32.89 
 
 
371 aa  190  2.9999999999999997e-47  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.818052  normal 
 
 
-
 
NC_009921  Franean1_5573  acyl-CoA dehydrogenase domain-containing protein  32.75 
 
 
392 aa  189  5e-47  Frankia sp. EAN1pec  Bacteria  normal  0.33081  normal 
 
 
-
 
NC_010676  Bphyt_5105  acyl-CoA dehydrogenase domain protein  35.2 
 
 
384 aa  189  5e-47  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1806  acyl-CoA dehydrogenase domain-containing protein  35.49 
 
 
361 aa  187  2e-46  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.133917  normal 
 
 
-
 
NC_007948  Bpro_3846  acyl-CoA dehydrogenase-like  35.14 
 
 
371 aa  187  2e-46  Polaromonas sp. JS666  Bacteria  normal  normal  0.94503 
 
 
-
 
NC_007974  Rmet_5529  putative acyl-CoA dehydrogenase  35.53 
 
 
379 aa  187  3e-46  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3836  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  36.2 
 
 
388 aa  186  6e-46  Ralstonia eutropha JMP134  Bacteria  normal  0.498534  n/a   
 
 
-
 
NC_008705  Mkms_5364  acyl-CoA dehydrogenase domain-containing protein  35.14 
 
 
385 aa  186  8e-46  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1645  acyl-CoA dehydrogenase-like  34.57 
 
 
371 aa  186  8e-46  Rhodoferax ferrireducens T118  Bacteria  normal  0.700839  n/a   
 
 
-
 
NC_008146  Mmcs_5275  acyl-CoA dehydrogenase-like protein  35.14 
 
 
385 aa  186  8e-46  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5654  acyl-CoA dehydrogenase domain-containing protein  35.14 
 
 
385 aa  185  9e-46  Mycobacterium sp. JLS  Bacteria  normal  0.693772  normal 
 
 
-
 
NC_010338  Caul_3427  acyl-CoA dehydrogenase domain-containing protein  35.47 
 
 
371 aa  184  2.0000000000000003e-45  Caulobacter sp. K31  Bacteria  normal  0.143009  normal  0.517094 
 
 
-
 
NC_007973  Rmet_0945  acyl-CoA dehydrogenase-like protein  33.87 
 
 
372 aa  184  2.0000000000000003e-45  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1807  acyl-CoA dehydrogenase domain protein  35.43 
 
 
381 aa  184  2.0000000000000003e-45  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.239478  n/a   
 
 
-
 
NC_008781  Pnap_3225  acyl-CoA dehydrogenase domain-containing protein  35.14 
 
 
371 aa  184  3e-45  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1873  acyl-CoA dehydrogenase domain protein  35.11 
 
 
376 aa  183  4.0000000000000006e-45  Ralstonia pickettii 12D  Bacteria  normal  0.451558  normal  0.28146 
 
 
-
 
NC_009921  Franean1_4583  acyl-CoA dehydrogenase domain-containing protein  37.79 
 
 
371 aa  182  6e-45  Frankia sp. EAN1pec  Bacteria  normal  0.277909  normal  0.943502 
 
 
-
 
NC_012791  Vapar_1273  acyl-CoA dehydrogenase domain protein  34.86 
 
 
371 aa  182  8.000000000000001e-45  Variovorax paradoxus S110  Bacteria  normal  0.592297  n/a   
 
 
-
 
NC_009338  Mflv_4380  acyl-CoA dehydrogenase domain-containing protein  34.39 
 
 
380 aa  181  1e-44  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.629178  normal 
 
 
-
 
NC_008785  BMASAVP1_A0208  acyl-CoA dehydrogenase domain-containing protein  35.92 
 
 
376 aa  181  1e-44  Burkholderia mallei SAVP1  Bacteria  normal  0.0837363  n/a   
 
 
-
 
NC_013440  Hoch_2701  acyl-CoA dehydrogenase domain protein  33.51 
 
 
395 aa  181  2e-44  Haliangium ochraceum DSM 14365  Bacteria  normal  0.223315  normal  0.557916 
 
 
-
 
NC_006348  BMA3232  acyl-CoA dehydrogenase domain-containing protein  35.92 
 
 
376 aa  181  2e-44  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0636  acyl-CoA dehydrogenase domain-containing protein  35.92 
 
 
376 aa  181  2e-44  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2811  acyl-CoA dehydrogenase domain-containing protein  35.92 
 
 
376 aa  181  2e-44  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1384  acyl-CoA dehydrogenase domain-containing protein  35.92 
 
 
376 aa  181  2e-44  Burkholderia mallei NCTC 10229  Bacteria  normal  0.92204  n/a   
 
 
-
 
NC_009076  BURPS1106A_0472  acyl-CoA dehydrogenase domain-containing protein  35.92 
 
 
376 aa  181  2e-44  Burkholderia pseudomallei 1106a  Bacteria  normal  0.627616  n/a   
 
 
-
 
NC_008726  Mvan_4007  acyl-CoA dehydrogenase domain-containing protein  34.95 
 
 
365 aa  180  2.9999999999999997e-44  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_0452  acyl-CoA dehydrogenase domain-containing protein  35.66 
 
 
376 aa  180  4e-44  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2196  acyl-CoA dehydrogenase domain protein  33.6 
 
 
376 aa  179  7e-44  Ralstonia pickettii 12J  Bacteria  normal  normal  0.341698 
 
 
-
 
NC_013510  Tcur_1878  acyl-CoA dehydrogenase domain protein  38.73 
 
 
369 aa  179  9e-44  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0940842  n/a   
 
 
-
 
NC_007651  BTH_I0395  acyl-CoA dehydrogenase domain-containing protein  35.62 
 
 
376 aa  178  2e-43  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2888  acyl-CoA dehydrogenase domain-containing protein  36.8 
 
 
381 aa  178  2e-43  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.397176  normal 
 
 
-
 
NC_008786  Veis_2105  acyl-CoA dehydrogenase domain-containing protein  34.7 
 
 
371 aa  177  3e-43  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2619  acyl-CoA dehydrogenase domain-containing protein  35.29 
 
 
366 aa  177  3e-43  Salinispora tropica CNB-440  Bacteria  normal  0.0175274  normal  0.715708 
 
 
-
 
NC_013757  Gobs_2178  acyl-CoA dehydrogenase domain protein  35.26 
 
 
383 aa  176  4e-43  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.501844  n/a   
 
 
-
 
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