8 homologs were found in PanDaTox collection
for query gene RPD_3531 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007958  RPD_3531  PilT protein-like  100 
 
 
162 aa  333  3.9999999999999995e-91  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.17101  normal 
 
 
-
 
NC_008346  Swol_1837  PilT protein-like protein  39.6 
 
 
153 aa  89.7  1e-17  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.0877816  n/a   
 
 
-
 
NC_011885  Cyan7425_0178  PilT protein domain protein  37.14 
 
 
148 aa  79.7  0.00000000000002  Cyanothece sp. PCC 7425  Bacteria  n/a    normal  0.110884 
 
 
-
 
NC_007925  RPC_3724  PilT protein-like  30.92 
 
 
146 aa  58.5  0.00000004  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_2035  PilT domain-containing protein  29.37 
 
 
151 aa  52  0.000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0116997  n/a   
 
 
-
 
NC_009523  RoseRS_0621  PilT domain-containing protein  29.13 
 
 
148 aa  49.3  0.00002  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0550538 
 
 
-
 
NC_007644  Moth_0252  PilT protein-like  27.91 
 
 
155 aa  44.3  0.0006  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0129  hypothetical protein  26 
 
 
176 aa  43.5  0.001  Methylobacterium populi BJ001  Bacteria  normal  0.647115  normal  0.0310424 
 
 
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