7 homologs were found in PanDaTox collection
for query gene RPD_3121 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007958  RPD_3121  hypothetical protein  100 
 
 
351 aa  713    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.496795  normal  0.881933 
 
 
-
 
NC_007778  RPB_2344  hypothetical protein  83.63 
 
 
352 aa  575  1.0000000000000001e-163  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.163785  normal  0.669867 
 
 
-
 
NC_003296  RS04819  putative lipoprotein transmembrane  39.8 
 
 
321 aa  121  1.9999999999999998e-26  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS05678  putative lipoprotein transmembrane  39.8 
 
 
321 aa  121  1.9999999999999998e-26  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2824  PAAR repeat-containing protein  30.91 
 
 
456 aa  49.7  0.00008  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1117  hypothetical protein  26.09 
 
 
163 aa  46.2  0.0008  Campylobacter jejuni RM1221  Bacteria  normal  0.152735  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4704  lipase class 3  29.38 
 
 
240 aa  45.4  0.001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
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