9 homologs were found in PanDaTox collection
for query gene RPD_1244 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007958  RPD_1244  hypothetical protein  100 
 
 
169 aa  348  2e-95  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1129  hypothetical protein  87.5 
 
 
168 aa  288  2e-77  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00426459  normal  0.464003 
 
 
-
 
NC_011004  Rpal_1262  hypothetical protein  81.55 
 
 
168 aa  278  2e-74  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.866294  n/a   
 
 
-
 
NC_007925  RPC_4326  hypothetical protein  77.71 
 
 
169 aa  256  7e-68  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.238308 
 
 
-
 
NC_007964  Nham_4012  hypothetical protein  74.64 
 
 
170 aa  228  3e-59  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2382  hypothetical protein  70.34 
 
 
176 aa  215  2.9999999999999998e-55  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.68397 
 
 
-
 
NC_007406  Nwi_2699  hypothetical protein  64.6 
 
 
170 aa  206  1e-52  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0230976  normal  0.887473 
 
 
-
 
NC_008347  Mmar10_2055  hypothetical protein  45.65 
 
 
176 aa  124  8.000000000000001e-28  Maricaulis maris MCS10  Bacteria  normal  normal  0.42458 
 
 
-
 
NC_007643  Rru_A0220  hypothetical protein  41.72 
 
 
158 aa  109  2.0000000000000002e-23  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
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