4 homologs were found in PanDaTox collection
for query gene RPC_R0050 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007925  RPC_R0050    100 
 
 
93 bp  184  2.0000000000000003e-45  Rhodopseudomonas palustris BisB18  Bacteria  normal  decreased coverage  0.000329156 
 
 
-
 
NC_007958  RPD_R0028    97.87 
 
 
89 bp  85.7  0.000000000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_miscRNA6  gcvT  97.78 
 
 
91 bp  81.8  0.00000000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0692861 
 
 
-
 
NC_007964  Nham_R0026    97.67 
 
 
89 bp  77.8  0.0000000000004  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>