274 homologs were found in PanDaTox collection
for query gene RPC_4364 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007925  RPC_4364  MarR family transcriptional regulator  100 
 
 
308 aa  620  1e-177  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.258723  normal  0.018546 
 
 
-
 
NC_011004  Rpal_1223  transcriptional regulator, MarR family with acetyltransferase activity  69 
 
 
312 aa  413  1e-114  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1078  MarR family transcriptional regulator  66.56 
 
 
307 aa  406  1.0000000000000001e-112  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.273595 
 
 
-
 
NC_009485  BBta_2336  MarR family transcriptional regulator  63.16 
 
 
309 aa  381  1e-105  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_5167  MarR family transcriptional regulator  54.85 
 
 
314 aa  308  8e-83  Methylobacterium sp. 4-46  Bacteria  normal  0.0893639  normal  0.0785126 
 
 
-
 
NC_011894  Mnod_6358  transcriptional regulator, MarR family with acetyltransferase activity  52.81 
 
 
326 aa  307  1.0000000000000001e-82  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.788549  n/a   
 
 
-
 
NC_007948  Bpro_3019  MarR family transcriptional regulator  53.75 
 
 
316 aa  305  6e-82  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2109  MarR family transcriptional regulator  50.81 
 
 
314 aa  296  3e-79  Chelativorans sp. BNC1  Bacteria  normal  0.67396  n/a   
 
 
-
 
NC_012791  Vapar_2224  transcriptional regulator, MarR family with acetyltransferase activity  51.82 
 
 
320 aa  289  4e-77  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2408  MarR family transcriptional regulator  48.31 
 
 
305 aa  288  5.0000000000000004e-77  Pseudomonas fluorescens Pf0-1  Bacteria  normal  hitchhiker  0.00944596 
 
 
-
 
NC_011071  Smal_1052  transcriptional regulator, MarR family with acetyltransferase activity  49.49 
 
 
304 aa  281  9e-75  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0668577  normal  0.704803 
 
 
-
 
NC_008688  Pden_4525  MarR family transcriptional regulator  48.68 
 
 
315 aa  276  2e-73  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2507  transcriptional regulator, MarR family with acetyltransferase activity  46.82 
 
 
305 aa  268  8e-71  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2761  transcriptional regulator, MarR family with acetyltransferase activity  46.05 
 
 
305 aa  267  2e-70  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.690582  normal  0.688792 
 
 
-
 
NC_013595  Sros_2753  MarR family transcriptional regulator  46.64 
 
 
299 aa  254  1.0000000000000001e-66  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0669 
 
 
-
 
NC_010622  Bphy_0291  MarR family transcriptional regulator  44.41 
 
 
307 aa  253  2.0000000000000002e-66  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_3457  MarR family transcriptional regulator  44.7 
 
 
310 aa  246  4e-64  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.965318  hitchhiker  0.0098073 
 
 
-
 
NC_009667  Oant_1080  GCN5-related N-acetyltransferase  44.52 
 
 
309 aa  245  6e-64  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.48831  n/a   
 
 
-
 
NC_013947  Snas_3717  transcriptional regulator, MarR family with acetyltransferase activity  43.43 
 
 
310 aa  242  5e-63  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.554507  normal  0.112952 
 
 
-
 
NC_010681  Bphyt_0559  transcriptional regulator, MarR family with acetyltransferase activity  43.51 
 
 
308 aa  240  2.9999999999999997e-62  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.380948 
 
 
-
 
NC_007951  Bxe_A4157  MarR family transcriptional regulator  43.83 
 
 
308 aa  237  2e-61  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.963186 
 
 
-
 
NC_013131  Caci_2134  transcriptional regulator, MarR family with acetyltransferase activity  43.22 
 
 
322 aa  234  2.0000000000000002e-60  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_0978  MarR family transcriptional regulator  39.47 
 
 
310 aa  217  2e-55  Acidiphilium cryptum JF-5  Bacteria  normal  0.154037  n/a   
 
 
-
 
NC_010725  Mpop_2115  transcriptional regulator, MarR family with acetyltransferase activity  40.58 
 
 
317 aa  202  8e-51  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_2015  GCN5-related N-acetyltransferase  31.89 
 
 
306 aa  192  5e-48  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0779  transcriptional regulator  39.87 
 
 
318 aa  186  3e-46  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.119696  normal  0.0560901 
 
 
-
 
NC_010338  Caul_0210  GCN5-related N-acetyltransferase  51.85 
 
 
162 aa  179  4.999999999999999e-44  Caulobacter sp. K31  Bacteria  normal  normal  0.312763 
 
 
-
 
NC_009921  Franean1_4388  GCN5-related N-acetyltransferase  52.98 
 
 
163 aa  163  4.0000000000000004e-39  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_3649  transcriptional regulator, MarR family with acetyltransferase activity  31.6 
 
 
311 aa  155  5.0000000000000005e-37  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00196269  normal  0.251982 
 
 
-
 
NC_009428  Rsph17025_0427  GCN5-related N-acetyltransferase  44.3 
 
 
161 aa  132  6e-30  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.036557 
 
 
-
 
NC_007493  RSP_0752  acetyltransferase  41.94 
 
 
161 aa  125  8.000000000000001e-28  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2409  GCN5-related N-acetyltransferase  41.94 
 
 
161 aa  125  8.000000000000001e-28  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.999952 
 
 
-
 
NC_010676  Bphyt_5083  transcriptional regulator, MarR family with acetyltransferase activity  32.51 
 
 
294 aa  117  3e-25  Burkholderia phytofirmans PsJN  Bacteria  normal  0.569191  normal  0.0231786 
 
 
-
 
NC_010002  Daci_5296  MarR family transcriptional regulator  29.07 
 
 
337 aa  114  1.0000000000000001e-24  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_2651  transcriptional regulator, MarR family  42.54 
 
 
143 aa  114  2.0000000000000002e-24  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.512568  normal 
 
 
-
 
NC_014158  Tpau_2501  transcriptional regulator, MarR family with acetyltransferase activity  31.54 
 
 
289 aa  112  1.0000000000000001e-23  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2189  transcriptional regulator, MarR family with acetyltransferase activity  28.16 
 
 
325 aa  111  2.0000000000000002e-23  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2471  MarR family transcriptional regulator  27.89 
 
 
321 aa  110  4.0000000000000004e-23  Serratia proteamaculans 568  Bacteria  normal  0.536093  normal 
 
 
-
 
NC_007348  Reut_B4630  MarR family transcriptional regulator  27.15 
 
 
321 aa  108  8.000000000000001e-23  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_5740  MarR family transcriptional regulator  27.72 
 
 
326 aa  105  7e-22  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6104  MarR family transcriptional regulator  27.72 
 
 
326 aa  105  7e-22  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6586  MarR family transcriptional regulator  27.72 
 
 
326 aa  105  1e-21  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.107316  normal  0.0388033 
 
 
-
 
NC_008391  Bamb_4043  MarR family transcriptional regulator  27.3 
 
 
326 aa  105  1e-21  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.529285 
 
 
-
 
NC_010625  Bphy_6607  MarR family transcriptional regulator  27.87 
 
 
329 aa  104  2e-21  Burkholderia phymatum STM815  Bacteria  normal  0.542838  normal 
 
 
-
 
NC_011989  Avi_2874  hypothetical protein  27.95 
 
 
313 aa  103  3e-21  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010087  Bmul_6026  MarR family transcriptional regulator  29.21 
 
 
325 aa  102  1e-20  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4501  MarR family transcriptional regulator  26.43 
 
 
336 aa  102  1e-20  Burkholderia ambifaria MC40-6  Bacteria  normal  0.795895  normal 
 
 
-
 
NC_010505  Mrad2831_0971  MarR family transcriptional regulator  32.76 
 
 
291 aa  102  1e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7562  MarR family transcriptional regulator  26.45 
 
 
326 aa  100  4e-20  Burkholderia sp. 383  Bacteria  normal  normal  0.774028 
 
 
-
 
NC_013132  Cpin_2652  GCN5-related N-acetyltransferase  34.67 
 
 
166 aa  95.9  8e-19  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.499326  normal 
 
 
-
 
NC_012850  Rleg_2529  transcriptional regulator, MarR family with acetyltransferase activity  31.23 
 
 
291 aa  94.4  2e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2718  transcriptional regulator  29.73 
 
 
290 aa  94  3e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1745  MarR family transcriptional regulator  30.14 
 
 
291 aa  91.3  2e-17  Methylobacterium sp. 4-46  Bacteria  normal  0.550965  normal 
 
 
-
 
NC_011663  Sbal223_3486  transcriptional regulator, MarR family with acetyltransferase activity  26.43 
 
 
349 aa  84.7  0.000000000000002  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2775  putative acetyltransferase  27.33 
 
 
312 aa  84.3  0.000000000000002  Shewanella amazonensis SB2B  Bacteria  normal  0.22239  normal 
 
 
-
 
NC_009052  Sbal_0762  MarR family transcriptional regulator  26.43 
 
 
347 aa  84.3  0.000000000000002  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_5800  Peptidyl-dipeptidase Dcp  30.2 
 
 
848 aa  84.3  0.000000000000003  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.882586 
 
 
-
 
NC_010506  Swoo_0861  MarR family transcriptional regulator  26.41 
 
 
334 aa  83.6  0.000000000000004  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0858  MarR family transcriptional regulator  25.89 
 
 
320 aa  83.6  0.000000000000004  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0856  MarR family transcriptional regulator  25.4 
 
 
352 aa  82.4  0.000000000000009  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3368  MarR family transcriptional regulator  25.25 
 
 
340 aa  81.6  0.00000000000001  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0737  MarR family transcriptional regulator  26.16 
 
 
322 aa  82  0.00000000000001  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_2131  GCN5-related N-acetyltransferase  33.33 
 
 
162 aa  81.3  0.00000000000002  Paracoccus denitrificans PD1222  Bacteria  normal  0.649673  normal 
 
 
-
 
NC_011369  Rleg2_2226  transcriptional regulator, MarR family with acetyltransferase activity  30.18 
 
 
291 aa  81.3  0.00000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.326568  normal 
 
 
-
 
NC_009665  Shew185_3555  MarR family transcriptional regulator  26.07 
 
 
349 aa  81.3  0.00000000000002  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0769  MarR family transcriptional regulator  25.86 
 
 
313 aa  80.5  0.00000000000003  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_2004  transcriptional regulator  27.74 
 
 
142 aa  77.4  0.0000000000003  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.112591  n/a   
 
 
-
 
NC_009997  Sbal195_3677  MarR family transcriptional regulator  26.43 
 
 
347 aa  77  0.0000000000004  Shewanella baltica OS195  Bacteria  normal  normal  0.164477 
 
 
-
 
NC_009783  VIBHAR_03639  hypothetical protein  26.24 
 
 
283 aa  74.7  0.000000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011887  Mnod_8209  transcriptional regulator, MarR family with acetyltransferase activity  28.53 
 
 
291 aa  74.3  0.000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0916  MarR family transcriptional regulator  25.45 
 
 
309 aa  72.8  0.000000000006  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_0758  MarR family transcriptional regulator  25.25 
 
 
340 aa  70.5  0.00000000003  Shewanella sp. MR-4  Bacteria  normal  0.575912  normal 
 
 
-
 
NC_008322  Shewmr7_3265  MarR family transcriptional regulator  25.25 
 
 
326 aa  70.5  0.00000000003  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_002424  transcriptional regulator MarR family/GCN5-related N-acetyltransferase  26.95 
 
 
301 aa  70.1  0.00000000004  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3472  MarR family transcriptional regulator  26.71 
 
 
326 aa  69.7  0.00000000006  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp1214  hypothetical protein  22.48 
 
 
319 aa  63.5  0.000000004  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_011662  Tmz1t_0731  Carbonate dehydratase  39.13 
 
 
380 aa  63.2  0.000000005  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1391  MarR family transcriptional regulator  24.91 
 
 
307 aa  63.2  0.000000005  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_006369  lpl1220  hypothetical protein  22.48 
 
 
319 aa  62.8  0.000000006  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009441  Fjoh_4320  MarR family transcriptional regulator  23.13 
 
 
345 aa  58.5  0.0000001  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_005707  BCE_A0172  transcriptional regulator, MarR family protein  24.82 
 
 
151 aa  58.2  0.0000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011777  BCAH820_B0290  transcriptional regulator, MarR family protein  24.82 
 
 
151 aa  58.2  0.0000002  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009720  Xaut_1302  MarR family transcriptional regulator  36.97 
 
 
154 aa  56.2  0.0000007  Xanthobacter autotrophicus Py2  Bacteria  normal  0.475565  normal 
 
 
-
 
NC_007948  Bpro_0267  GCN5-related N-acetyltransferase  34.65 
 
 
162 aa  55.8  0.0000009  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3318  GCN5-related N-acetyltransferase  34.4 
 
 
157 aa  55.5  0.000001  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.0859673 
 
 
-
 
NC_011060  Ppha_1389  GCN5-related N-acetyltransferase  28.06 
 
 
212 aa  54.7  0.000002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  decreased coverage  0.00377993  n/a   
 
 
-
 
NC_009483  Gura_0479  MarR family transcriptional regulator  26.92 
 
 
155 aa  55.1  0.000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0728  MarR/EmrR family transcriptional regulator  32.56 
 
 
168 aa  54.7  0.000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3701  GCN5-related N-acetyltransferase  33.04 
 
 
167 aa  53.5  0.000004  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2149  transcriptional regulator, MarR family  25.44 
 
 
150 aa  53.1  0.000005  Meiothermus silvanus DSM 9946  Bacteria  normal  0.176051  normal  0.0619167 
 
 
-
 
NC_013757  Gobs_4186  GCN5-related N-acetyltransferase  29.14 
 
 
168 aa  53.1  0.000006  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2077  MarR family transcriptional regulator  33.33 
 
 
157 aa  52.8  0.000008  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0099  GCN5-related N-acetyltransferase:carbonic anhydrase  34.21 
 
 
387 aa  52.4  0.000009  Dechloromonas aromatica RCB  Bacteria  normal  0.609712  normal 
 
 
-
 
NC_009636  Smed_0576  transcriptional regulator, TrmB  39.78 
 
 
158 aa  52.4  0.00001  Sinorhizobium medicae WSM419  Bacteria  normal  0.0950259  normal 
 
 
-
 
NC_007973  Rmet_1952  GCN5-related N-acetyltransferase  32.14 
 
 
192 aa  52  0.00001  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.941364 
 
 
-
 
NC_010511  M446_2842  MarR family transcriptional regulator  36.26 
 
 
154 aa  52.4  0.00001  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5915  GCN5-related N-acetyltransferase  30.36 
 
 
162 aa  52  0.00001  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0886  MarR family transcriptional regulator  36.56 
 
 
151 aa  51.6  0.00002  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1729  regulatory protein, MarR  35.44 
 
 
162 aa  51.6  0.00002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_64320  hypothetical protein  32.63 
 
 
150 aa  51.2  0.00002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.161713  normal 
 
 
-
 
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