18 homologs were found in PanDaTox collection
for query gene RPC_3179 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007925  RPC_3179  hypothetical protein  100 
 
 		 105 aa  209  7.999999999999999e-54  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.534135  normal  0.837156 
 
 
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NC_007925  RPC_3174  XRE family transcriptional regulator  88.68 
 
 		 98 aa  78.6  0.00000000000003  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.00826056  normal  1 
 
 
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NC_007643  Rru_A3411  XRE family transcriptional regulator  55.77 
 
 		 97 aa  58.2  0.00000004  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
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NC_007958  RPD_2225  hypothetical protein  69.57 
 
 		 116 aa  52.8  0.000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.525865  normal  0.528424 
 
 
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NC_006368  lpp0074  hypothetical protein  42.86 
 
 		 94 aa  46.6  0.0001  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009715  CCV52592_2042  putative cytochrome c  39.62 
 
 		 90 aa  46.6  0.0001  Campylobacter curvus 525.92  Bacteria  normal  1  n/a   
 
 
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NC_011060  Ppha_2529  transcriptional regulator, XRE family  32.94 
 
 		 93 aa  45.8  0.0002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.000784971  n/a   
 
 
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NC_011060  Ppha_2243  transcriptional regulator, XRE family  51.22 
 
 		 112 aa  45.8  0.0002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009715  CCV52592_0928  DNA polymerase III delta prime subunit  39.22 
 
 		 90 aa  46.2  0.0002  Campylobacter curvus 525.92  Bacteria  normal  1  n/a   
 
 
-
 
NC_007651  BTH_I3276  hypothetical protein  57.14 
 
 		 105 aa  44.3  0.0005  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_0658  XRE family transcriptional regulator  41.86 
 
 		 95 aa  43.1  0.001  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013721  HMPREF0424_1165  toxin-antitoxin system, antitoxin component, Xre family  37.25 
 
 		 94 aa  42.7  0.002  Gardnerella vaginalis 409-05  Bacteria  n/a    decreased coverage  0.00000000604987 
 
 
-
 
NC_010725  Mpop_4582  transcriptional regulator, XRE family  37.88 
 
 		 99 aa  41.6  0.003  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.752323 
 
 
-
 
NC_007512  Plut_0827  XRE family transcriptional regulator  50 
 
 		 116 aa  40.4  0.008  Chlorobium luteolum DSM 273  Bacteria  normal  0.551431  normal  0.496549 
 
 
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NC_008576  Mmc1_2735  XRE family transcriptional regulator  53.12 
 
 		 104 aa  40.4  0.009  Magnetococcus sp. MC-1  Bacteria  normal  1  hitchhiker  0.000363521 
 
 
-
 
NC_008576  Mmc1_2564  XRE family transcriptional regulator  53.12 
 
 		 104 aa  40.4  0.009  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  0.229485 
 
 
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NC_011146  Gbem_1829  transcriptional regulator, XRE family  37.5 
 
 		 103 aa  40.4  0.009  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_1336  XRE family transcriptional regulator  53.12 
 
 		 104 aa  40.4  0.009  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  0.40166 
 
 
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