14 homologs were found in PanDaTox collection
for query gene RPC_1449 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007925  RPC_1449  hypothetical protein  100 
 
 		 498 aa  924    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0965901  normal  1 
 
 
-
 
NC_007958  RPD_1633  hypothetical protein  56.5 
 
 		 498 aa  216  5.9999999999999996e-55  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.086496  normal  0.526355 
 
 
-
 
NC_011004  Rpal_4488  hypothetical protein  65.12 
 
 		 485 aa  213  4.9999999999999996e-54  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_1313  hypothetical protein  53.57 
 
 		 379 aa  167  2.9999999999999998e-40  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_007406  Nwi_1084  hypothetical protein  46.22 
 
 		 385 aa  166  6.9999999999999995e-40  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.597778  normal  0.461762 
 
 
-
 
NC_010172  Mext_0889  hypothetical protein  33.01 
 
 		 399 aa  85.1  0.000000000000003  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.135602 
 
 
-
 
NC_010725  Mpop_0815  hypothetical protein  38.46 
 
 		 435 aa  85.1  0.000000000000003  Methylobacterium populi BJ001  Bacteria  normal  0.872238  normal  0.105867 
 
 
-
 
NC_011757  Mchl_0849  hypothetical protein  33.01 
 
 		 399 aa  85.1  0.000000000000003  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  decreased coverage  0.00517849 
 
 
-
 
NC_011894  Mnod_4959  hypothetical protein  37.97 
 
 		 294 aa  84  0.000000000000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.096287  n/a   
 
 
-
 
NC_010511  M446_4931  hypothetical protein  37.91 
 
 		 288 aa  81.6  0.00000000000003  Methylobacterium sp. 4-46  Bacteria  normal  0.154084  normal  1 
 
 
-
 
NC_010505  Mrad2831_1950  hypothetical protein  35.62 
 
 		 440 aa  74.3  0.000000000005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.309179 
 
 
-
 
NC_009719  Plav_2489  hypothetical protein  50 
 
 		 196 aa  53.1  0.00001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.0598179  normal  0.0438678 
 
 
-
 
NC_009485  BBta_5560  hypothetical protein  54.55 
 
 		 573 aa  50.4  0.00007  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.776958 
 
 
-
 
NC_007778  RPB_1624  hypothetical protein  58.82 
 
 		 503 aa  43.9  0.006  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.552024  normal  0.642383 
 
 
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