11 homologs were found in PanDaTox collection
for query gene RPB_3544 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007406  Nwi_2243  nitrous oxidase accessory protein  72.75 
 
 
455 aa  654    Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.685019  normal 
 
 
-
 
NC_007778  RPB_3544  parallel beta-helix repeat-containing protein  100 
 
 
451 aa  886    Rhodopseudomonas palustris HaA2  Bacteria  normal  0.502732  normal  0.506953 
 
 
-
 
NC_007925  RPC_1748  twin-arginine translocation pathway signal  75.93 
 
 
454 aa  657    Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.166004 
 
 
-
 
NC_007958  RPD_1920  twin-arginine translocation pathway signal  90.69 
 
 
450 aa  790    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.69001 
 
 
-
 
NC_007964  Nham_2646  nitrous oxidase accessory protein  76.11 
 
 
455 aa  648    Nitrobacter hamburgensis X14  Bacteria  normal  0.696953  n/a   
 
 
-
 
NC_011004  Rpal_2030  hypothetical protein  80.79 
 
 
452 aa  724    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.789621  n/a   
 
 
-
 
NC_009485  BBta_3016  hypothetical protein  70.56 
 
 
458 aa  603  1.0000000000000001e-171  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.399987 
 
 
-
 
NC_011369  Rleg2_0795  hypothetical protein  44.91 
 
 
456 aa  335  7e-91  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.19124 
 
 
-
 
NC_012850  Rleg_0908  hypothetical protein  44.34 
 
 
449 aa  332  1e-89  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0731349  normal  0.235988 
 
 
-
 
NC_011832  Mpal_0810  hypothetical protein  23.21 
 
 
464 aa  47.4  0.0005  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_009954  Cmaq_0230  glycoside hydrolase family protein  25 
 
 
462 aa  43.1  0.01  Caldivirga maquilingensis IC-167  Archaea  normal  normal 
 
 
-
 
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