10 homologs were found in PanDaTox collection
for query gene RPB_3451 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007778  RPB_3451  hypothetical protein  100 
 
 
466 aa  942    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.139963 
 
 
-
 
NC_007958  RPD_2000  hypothetical protein  90.13 
 
 
466 aa  860    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.203804  normal 
 
 
-
 
NC_011004  Rpal_2129  hypothetical protein  80.3 
 
 
467 aa  779    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0876375  n/a   
 
 
-
 
NC_007925  RPC_1833  hypothetical protein  66.17 
 
 
467 aa  628  1e-179  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.000567311  normal  0.596658 
 
 
-
 
NC_007964  Nham_1436  hypothetical protein  60.52 
 
 
464 aa  562  1.0000000000000001e-159  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3069  hypothetical protein  57.93 
 
 
489 aa  557  1e-157  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.561523  normal 
 
 
-
 
NC_007406  Nwi_1190  hypothetical protein  58.15 
 
 
463 aa  551  1e-156  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0513  hypothetical protein  26.88 
 
 
382 aa  132  1.0000000000000001e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.425317  normal  0.170989 
 
 
-
 
NC_009719  Plav_0933  hypothetical protein  25.93 
 
 
473 aa  80.5  0.00000000000007  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_0938  hypothetical protein  24.39 
 
 
453 aa  57  0.0000007  Maricaulis maris MCS10  Bacteria  normal  0.511729  normal  0.150478 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>