5 homologs were found in PanDaTox collection
for query gene RPB_3140 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007778  RPB_3140  hypothetical protein  100 
 
 
296 aa  581  1.0000000000000001e-165  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.525721 
 
 
-
 
NC_007925  RPC_0426  hypothetical protein  56.25 
 
 
295 aa  264  1e-69  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.490973  normal  0.403275 
 
 
-
 
NC_011004  Rpal_2349  hypothetical protein  47.12 
 
 
299 aa  214  1.9999999999999998e-54  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6006  hypothetical protein  34.84 
 
 
286 aa  112  9e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  decreased coverage  0.00787853 
 
 
-
 
NC_010511  M446_2863  rubrerythrin  32.93 
 
 
272 aa  75.5  0.0000000000009  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
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