14 homologs were found in PanDaTox collection
for query gene RPB_2375 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007778  RPB_2375  calcium-binding EF-hand protein  100 
 
 		 169 aa  340  5e-93  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.572136 
 
 
-
 
NC_009955  Dshi_3600  calcium-binding EF-hand-containing protein  37.76 
 
 		 202 aa  67.4  0.00000000009  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.799604  normal  0.113193 
 
 
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NC_009957  Dshi_3938  calcium-binding EF-hand-containing protein  37.76 
 
 		 202 aa  67.4  0.00000000009  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_2073  signal transduction protein  38.24 
 
 		 212 aa  51.2  0.000006  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0851765  normal  1 
 
 
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NC_009952  Dshi_2496  hypothetical protein  32.67 
 
 		 186 aa  50.1  0.00001  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  0.992211 
 
 
-
 
NC_007493  RSP_0416  calcium-binding EF-hand domain-containing protein  37.25 
 
 		 218 aa  49.7  0.00002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007802  Jann_3135  calcium-binding EF-hand  30.06 
 
 		 164 aa  48.9  0.00003  Jannaschia sp. CCS1  Bacteria  normal  0.850385  normal  0.160414 
 
 
-
 
NC_008254  Meso_1482  acid-shock protein  30.77 
 
 		 188 aa  47.4  0.0001  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008709  Ping_0991  calcium-binding EF-hand-containing protein  31.25 
 
 		 194 aa  43.1  0.002  Psychromonas ingrahamii 37  Bacteria  normal  0.0245104  normal  0.296766 
 
 
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NC_012856  Rpic12D_3042  putative signal transduction protein with EFhand domain protein  38.14 
 
 		 205 aa  43.1  0.002  Ralstonia pickettii 12D  Bacteria  normal  0.6189  normal  1 
 
 
-
 
NC_007973  Rmet_3380  signal transduction protein  27.27 
 
 		 209 aa  42  0.004  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_4199  signal transduction protein  29.03 
 
 		 282 aa  41.2  0.007  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010682  Rpic_3389  putative signal transduction protein with EFhand domain  37.11 
 
 		 205 aa  40.8  0.008  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_3688  signal transduction protein  40.74 
 
 		 252 aa  40.8  0.009  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
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