13 homologs were found in PanDaTox collection
for query gene Psyr_4916 on replicon NC_007005
Organism: Pseudomonas syringae pv. syringae B728a



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007005  Psyr_4916  hypothetical protein  100 
 
 
108 aa  222  1e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  hitchhiker  0.000000285344  normal 
 
 
-
 
NC_004578  PSPTO_5362  hypothetical protein  85.19 
 
 
104 aa  189  2e-47  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.11263  n/a   
 
 
-
 
NC_007005  Psyr_0341  hypothetical protein  58.62 
 
 
77 aa  73.9  0.0000000000007  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.930967 
 
 
-
 
NC_007005  Psyr_4043  hypothetical protein  56.14 
 
 
77 aa  69.3  0.00000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.131676  normal 
 
 
-
 
NC_007005  Psyr_4773  hypothetical protein  48.28 
 
 
76 aa  65.1  0.0000000003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0890871 
 
 
-
 
NC_007492  Pfl01_3661  hypothetical protein  45.88 
 
 
112 aa  59.7  0.00000001  Pseudomonas fluorescens Pf0-1  Bacteria  decreased coverage  0.0000000000704866  normal  0.22086 
 
 
-
 
NC_010322  PputGB1_3667  hypothetical protein  36.47 
 
 
104 aa  56.2  0.0000001  Pseudomonas putida GB-1  Bacteria  hitchhiker  0.00000000000951062  decreased coverage  0.00000000000750539 
 
 
-
 
NC_002947  PP_4069  hypothetical protein  36.47 
 
 
99 aa  43.9  0.0007  Pseudomonas putida KT2440  Bacteria  hitchhiker  0.0000330915  unclonable  0.000000659796 
 
 
-
 
NC_009512  Pput_1771  hypothetical protein  34.74 
 
 
99 aa  43.9  0.0008  Pseudomonas putida F1  Bacteria  hitchhiker  0.000000000372178  decreased coverage  0.000314834 
 
 
-
 
NC_010501  PputW619_0090  hypothetical protein  29.91 
 
 
100 aa  42.7  0.002  Pseudomonas putida W619  Bacteria  normal  0.218001  hitchhiker  0.0000147409 
 
 
-
 
NC_010501  PputW619_1807  hypothetical protein  36.47 
 
 
103 aa  42.7  0.002  Pseudomonas putida W619  Bacteria  normal  0.512803  normal  0.194465 
 
 
-
 
NC_009512  Pput_0087  hypothetical protein  29.36 
 
 
105 aa  42  0.003  Pseudomonas putida F1  Bacteria  normal  normal  0.585828 
 
 
-
 
NC_002947  PP_0071  hypothetical protein  28.83 
 
 
153 aa  41.6  0.004  Pseudomonas putida KT2440  Bacteria  normal  0.664883  hitchhiker  0.0000574078 
 
 
-
 
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