6 homologs were found in PanDaTox collection
for query gene Pput_3400 on replicon NC_009512
Organism: Pseudomonas putida F1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009512  Pput_3400  hypothetical protein  100 
 
 
134 aa  277  4e-74  Pseudomonas putida F1  Bacteria  hitchhiker  0.000848695  normal 
 
 
-
 
NC_011365  Gdia_0938  hypothetical protein  33.07 
 
 
137 aa  90.5  7e-18  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0617197  normal  0.497199 
 
 
-
 
NC_008309  HS_0538  hypothetical protein  35.88 
 
 
148 aa  85.9  2e-16  Haemophilus somnus 129PT  Bacteria  normal  0.182019  n/a   
 
 
-
 
NC_008463  PA14_03166  hypothetical protein  39.06 
 
 
132 aa  82.8  0.000000000000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00000000962214  hitchhiker  0.00000000281336 
 
 
-
 
NC_002967  TDE1997  hypothetical protein  30.43 
 
 
126 aa  59.7  0.00000001  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A5704  hypothetical protein  33.73 
 
 
136 aa  57.8  0.00000006  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
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