3 homologs were found in PanDaTox collection
for query gene Pput_0678 on replicon NC_009512
Organism: Pseudomonas putida F1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009512  Pput_0678    100 
 
 
291 bp  577  1.0000000000000001e-163  Pseudomonas putida F1  Bacteria  hitchhiker  0.00761374  decreased coverage  0.00471016 
 
 
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NC_010501  PputW619_4936  phage integrase  85.56 
 
 
981 bp  226  3e-57  Pseudomonas putida W619  Bacteria  normal  0.0598447  hitchhiker  0.0000000940352 
 
 
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NC_010501  PputW619_0686  phage integrase  82.9 
 
 
981 bp  168  5e-40  Pseudomonas putida W619  Bacteria  hitchhiker  0.00180883  unclonable  0.0000000000000101632 
 
 
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