68 homologs were found in PanDaTox collection
for query gene PputW619_4356 on replicon NC_010501
Organism: Pseudomonas putida W619



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010501  PputW619_4356  filamentation induced by cAMP protein Fic  100 
 
 
443 aa  903    Pseudomonas putida W619  Bacteria  normal  0.871364  normal  0.139855 
 
 
-
 
NC_008759  Pnap_4940  filamentation induced by cAMP protein Fic  58.33 
 
 
462 aa  487  1e-136  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.857933  normal  0.500548 
 
 
-
 
NC_008781  Pnap_3262  filamentation induced by cAMP protein Fic  39.91 
 
 
466 aa  293  5e-78  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.793632  normal 
 
 
-
 
NC_013173  Dbac_3106  filamentation induced by cAMP protein Fic  39.05 
 
 
464 aa  273  5.000000000000001e-72  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3558  filamentation induced by cAMP protein Fic  36.59 
 
 
455 aa  260  3e-68  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.155206  normal 
 
 
-
 
NC_009430  Rsph17025_4224  hypothetical protein  41.16 
 
 
352 aa  170  6e-41  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.440664  normal  0.329944 
 
 
-
 
NC_007514  Cag_1097  hypothetical protein  27.9 
 
 
346 aa  129  1.0000000000000001e-28  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.149406  n/a   
 
 
-
 
NC_013162  Coch_0913  filamentation induced by cAMP protein Fic  35.21 
 
 
245 aa  113  8.000000000000001e-24  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.876617  n/a   
 
 
-
 
NC_011898  Ccel_2696  filamentation induced by cAMP protein Fic  27.62 
 
 
253 aa  77.8  0.0000000000004  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_4508  filamentation induced by cAMP protein Fic  29.05 
 
 
317 aa  77  0.0000000000006  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0160  filamentation induced by cAMP protein Fic  31.25 
 
 
245 aa  76.6  0.0000000000009  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.132154  n/a   
 
 
-
 
NC_008609  Ppro_2285  filamentation induced by cAMP protein Fic  30.22 
 
 
250 aa  74.3  0.000000000004  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2564  filamentation induced by cAMP protein Fic  28.32 
 
 
243 aa  73.9  0.000000000005  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_0810  filamentation induced by cAMP protein Fic  30.51 
 
 
267 aa  73.6  0.000000000007  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0799  filamentation induced by cAMP protein Fic  29.94 
 
 
267 aa  72.8  0.00000000001  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1233  filamentation induced by cAMP protein Fic  32.95 
 
 
248 aa  72  0.00000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2737  filamentation induced by cAMP protein Fic  29.89 
 
 
251 aa  70.1  0.00000000007  Geobacter uraniireducens Rf4  Bacteria  normal  0.0264056  n/a   
 
 
-
 
NC_008751  Dvul_2613  filamentation induced by cAMP protein Fic  30.23 
 
 
248 aa  69.7  0.00000000009  Desulfovibrio vulgaris DP4  Bacteria  normal  0.427308  normal 
 
 
-
 
NC_010001  Cphy_0273  filamentation induced by cAMP protein Fic  31.4 
 
 
306 aa  69.3  0.0000000001  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B2094  filamentation induced by cAMP protein Fic  32.35 
 
 
251 aa  69.7  0.0000000001  Burkholderia sp. 383  Bacteria  normal  0.437335  normal 
 
 
-
 
NC_010814  Glov_2836  filamentation induced by cAMP protein Fic  30.94 
 
 
250 aa  68.9  0.0000000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0086  filamentation induced by cAMP protein Fic  25.58 
 
 
304 aa  68.2  0.0000000003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008309  HS_1262  hypothetical protein  25.99 
 
 
249 aa  67.4  0.0000000004  Haemophilus somnus 129PT  Bacteria  normal  0.254788  n/a   
 
 
-
 
NC_011060  Ppha_0970  filamentation induced by cAMP protein Fic  31.21 
 
 
247 aa  67.4  0.0000000005  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.952557  n/a   
 
 
-
 
NC_010831  Cphamn1_2545  filamentation induced by cAMP protein Fic  30.23 
 
 
247 aa  66.2  0.000000001  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.992105  normal 
 
 
-
 
NC_009253  Dred_0817  filamentation induced by cAMP protein Fic  29.8 
 
 
256 aa  62.8  0.00000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0190  filamentation induced by cAMP protein Fic  29.41 
 
 
384 aa  59.3  0.0000001  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0357  Fic family protein  25 
 
 
260 aa  59.7  0.0000001  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_0779  filamentation induced by cAMP protein Fic  29.35 
 
 
236 aa  59.7  0.0000001  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_008942  Mlab_0909  hypothetical protein  25.45 
 
 
328 aa  58.2  0.0000003  Methanocorpusculum labreanum Z  Archaea  normal  0.27357  normal 
 
 
-
 
NC_009727  CBUD_1335  Fic family protein  29.09 
 
 
252 aa  58.2  0.0000003  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.324562  n/a   
 
 
-
 
NC_013170  Ccur_10760  hypothetical protein  26.32 
 
 
303 aa  57  0.0000006  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.553511  normal 
 
 
-
 
NC_010117  COXBURSA331_A2207  hypothetical protein  25.93 
 
 
348 aa  55.5  0.000002  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.00000284697  n/a   
 
 
-
 
NC_011060  Ppha_2616  death-on-curing family protein  25.33 
 
 
261 aa  55.8  0.000002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_2174  Fic family protein  25.93 
 
 
348 aa  55.1  0.000002  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0207  filamentation induced by cAMP protein Fic  25.71 
 
 
299 aa  55.1  0.000003  Atopobium parvulum DSM 20469  Bacteria  normal  hitchhiker  0.00576684 
 
 
-
 
NC_007514  Cag_0452  fic family protein  25.78 
 
 
261 aa  55.1  0.000003  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_1499  filamentation induced by cAMP protein Fic  29.35 
 
 
374 aa  52.8  0.00001  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_3305  filamentation induced by cAMP protein Fic  27.75 
 
 
393 aa  52.4  0.00002  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.735842 
 
 
-
 
NC_012880  Dd703_3428  filamentation induced by cAMP protein Fic  30.25 
 
 
380 aa  51.2  0.00003  Dickeya dadantii Ech703  Bacteria  normal  0.469085  n/a   
 
 
-
 
NC_007519  Dde_2915  hypothetical protein  24.87 
 
 
253 aa  51.6  0.00003  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00165114  n/a   
 
 
-
 
NC_013421  Pecwa_0711  filamentation induced by cAMP protein Fic  30.25 
 
 
380 aa  51.6  0.00003  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3441  hypothetical protein  25.25 
 
 
253 aa  51.2  0.00004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_1166  filamentation induced by cAMP protein Fic  25.29 
 
 
252 aa  50.4  0.00006  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0608775 
 
 
-
 
NC_008530  LGAS_1049  Fic family protein  26.06 
 
 
271 aa  50.1  0.00007  Lactobacillus gasseri ATCC 33323  Bacteria  decreased coverage  0.00000030649  normal 
 
 
-
 
NC_009512  Pput_0676  filamentation induced by cAMP protein Fic  25.21 
 
 
394 aa  50.4  0.00007  Pseudomonas putida F1  Bacteria  normal  0.721165  normal  0.0136984 
 
 
-
 
NC_007925  RPC_3396  filamentation induced by cAMP protein Fic  32.26 
 
 
222 aa  49.3  0.0001  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.342322  normal  0.190487 
 
 
-
 
NC_010498  EcSMS35_3916  Fic family protein  28.19 
 
 
431 aa  48.1  0.0003  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009051  Memar_1471  filamentation induced by cAMP protein Fic  26.05 
 
 
369 aa  48.1  0.0003  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4959  Fic family protein  28.19 
 
 
431 aa  48.1  0.0003  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009051  Memar_2116  filamentation induced by cAMP protein Fic  24.36 
 
 
426 aa  47.8  0.0004  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_004116  SAG2119  hypothetical protein  25.82 
 
 
373 aa  47.8  0.0005  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_0664  filamentation induced by cAMP protein Fic  22.93 
 
 
434 aa  47.4  0.0005  Methanococcus aeolicus Nankai-3  Archaea  normal  0.0557891  n/a   
 
 
-
 
NC_012856  Rpic12D_2694  filamentation induced by cAMP protein Fic  33.33 
 
 
76 aa  45.8  0.001  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_0951  filamentation induced by cAMP protein Fic  26.22 
 
 
380 aa  46.2  0.001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3867  hypothetical protein  26.22 
 
 
380 aa  46.2  0.001  Yersinia pestis Angola  Bacteria  normal  0.0777828  normal  0.0227388 
 
 
-
 
NC_010002  Daci_1077  filamentation induced by cAMP protein Fic  27.75 
 
 
393 aa  46.2  0.001  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.750525 
 
 
-
 
NC_009708  YpsIP31758_0896  Fic family protein  26.22 
 
 
380 aa  46.2  0.001  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0460  filamentation induced by cAMP protein Fic  25.38 
 
 
388 aa  45.8  0.001  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2084  ArsR family transcriptional regulator  45 
 
 
103 aa  45.4  0.002  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2726  filamentation induced by cAMP protein Fic  25.77 
 
 
395 aa  44.7  0.003  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002967  TDE2745  fic family protein  27.27 
 
 
271 aa  45.1  0.003  Treponema denticola ATCC 35405  Bacteria  normal  0.413938  n/a   
 
 
-
 
NC_010681  Bphyt_0300  filamentation induced by cAMP protein Fic  26.38 
 
 
398 aa  44.7  0.004  Burkholderia phytofirmans PsJN  Bacteria  normal  0.372367  normal 
 
 
-
 
NC_011832  Mpal_1350  filamentation induced by cAMP protein Fic  22.91 
 
 
443 aa  44.3  0.005  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.470357 
 
 
-
 
NC_009727  CBUD_0212a  Fic family protein  55.56 
 
 
88 aa  44.3  0.005  Coxiella burnetii Dugway 5J108-111  Bacteria  hitchhiker  0.00851652  n/a   
 
 
-
 
NC_013173  Dbac_0753  filamentation induced by cAMP protein Fic  28.39 
 
 
386 aa  43.9  0.005  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.424532  n/a   
 
 
-
 
NC_009667  Oant_0617  filamentation induced by cAMP protein Fic  26.16 
 
 
393 aa  43.9  0.005  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2012  ArsR family transcriptional regulator  38.71 
 
 
174 aa  43.9  0.006  Methanosarcina barkeri str. Fusaro  Archaea  decreased coverage  0.00760296  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>