12 homologs were found in PanDaTox collection
for query gene PputW619_1807 on replicon NC_010501
Organism: Pseudomonas putida W619



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010501  PputW619_1807  hypothetical protein  100 
 
 
103 aa  214  4e-55  Pseudomonas putida W619  Bacteria  normal  0.512803  normal  0.194465 
 
 
-
 
NC_010322  PputGB1_3667  hypothetical protein  91.67 
 
 
104 aa  185  2e-46  Pseudomonas putida GB-1  Bacteria  hitchhiker  0.00000000000951062  decreased coverage  0.00000000000750539 
 
 
-
 
NC_009512  Pput_1771  hypothetical protein  90.82 
 
 
99 aa  169  1e-41  Pseudomonas putida F1  Bacteria  hitchhiker  0.000000000372178  decreased coverage  0.000314834 
 
 
-
 
NC_002947  PP_4069  hypothetical protein  87.76 
 
 
99 aa  162  1.0000000000000001e-39  Pseudomonas putida KT2440  Bacteria  hitchhiker  0.0000330915  unclonable  0.000000659796 
 
 
-
 
NC_007492  Pfl01_3661  hypothetical protein  43.9 
 
 
112 aa  72.4  0.000000000002  Pseudomonas fluorescens Pf0-1  Bacteria  decreased coverage  0.0000000000704866  normal  0.22086 
 
 
-
 
NC_004578  PSPTO_5362  hypothetical protein  36.96 
 
 
104 aa  61.2  0.000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.11263  n/a   
 
 
-
 
NC_007005  Psyr_4916  hypothetical protein  36.26 
 
 
108 aa  57.4  0.00000007  Pseudomonas syringae pv. syringae B728a  Bacteria  hitchhiker  0.000000285344  normal 
 
 
-
 
NC_007005  Psyr_4043  hypothetical protein  31.51 
 
 
77 aa  54.7  0.0000004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.131676  normal 
 
 
-
 
NC_007005  Psyr_4773  hypothetical protein  33.33 
 
 
76 aa  48.9  0.00003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0890871 
 
 
-
 
NC_007005  Psyr_0341  hypothetical protein  34.21 
 
 
77 aa  48.1  0.00004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.930967 
 
 
-
 
NC_007492  Pfl01_1963  hypothetical protein  32.98 
 
 
123 aa  40.4  0.008  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4660  hypothetical protein  32.05 
 
 
119 aa  40.4  0.009  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
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