27 homologs were found in PanDaTox collection
for query gene PputW619_1339 on replicon NC_010501
Organism: Pseudomonas putida W619



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_1567  HK97 family phage major capsid protein  96.14 
 
 
414 aa  820    Pseudomonas putida KT2440  Bacteria  normal  0.944174  decreased coverage  0.0000690857 
 
 
-
 
NC_010501  PputW619_1339  HK97 family phage major capsid protein  100 
 
 
418 aa  854    Pseudomonas putida W619  Bacteria  normal  normal  0.124448 
 
 
-
 
NC_007794  Saro_0649  Phage major capsid protein, HK97  48.15 
 
 
465 aa  348  8e-95  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.296668  n/a   
 
 
-
 
NC_007434  BURPS1710b_1682  HK97 family phage major capsid protein  49.02 
 
 
418 aa  348  1e-94  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1600  phage major capsid protein, HK97 family  47.87 
 
 
433 aa  337  1.9999999999999998e-91  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2592  phage major capsid protein, HK97 family  47.76 
 
 
396 aa  317  4e-85  Shewanella baltica OS223  Bacteria  normal  normal  0.339104 
 
 
-
 
NC_004347  SO_2963  prophage LambdaSo, HK97 family major capsid protein  47.87 
 
 
396 aa  305  1.0000000000000001e-81  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008044  TM1040_1668  phage major capsid protein, HK97  45.33 
 
 
403 aa  295  7e-79  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A4465  phage major capsid protein, HK97 family  41.01 
 
 
405 aa  278  1e-73  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  hitchhiker  0.0000706363 
 
 
-
 
NC_010002  Daci_1634  major head protein  44.16 
 
 
405 aa  276  7e-73  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_0362  HK97 family phage major capsid protein  42.86 
 
 
449 aa  258  1e-67  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_0991  HK97 family phage major capsid protein  42.86 
 
 
449 aa  258  1e-67  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_0642  phage major head protein  42.49 
 
 
403 aa  248  1e-64  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3318  HK97 family phage major capsid protein  37.12 
 
 
433 aa  223  4e-57  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0235436 
 
 
-
 
NC_007493  RSP_2067  prophage LambdaSo, HK97 family major capsid protein  36.87 
 
 
433 aa  222  9e-57  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.023752  n/a   
 
 
-
 
NC_010623  Bphy_3394  HK97 family phage major capsid protein  34.58 
 
 
397 aa  207  3e-52  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00000000537798 
 
 
-
 
NC_010501  PputW619_3943  HK97 family phage major capsid protein  31.87 
 
 
400 aa  159  1e-37  Pseudomonas putida W619  Bacteria  normal  0.204605  normal 
 
 
-
 
NC_007204  Psyc_0461  major phage capsid subunit precursor  33.24 
 
 
417 aa  154  4e-36  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.561977 
 
 
-
 
NC_013757  Gobs_3579  phage major capsid protein, HK97  35.58 
 
 
411 aa  152  8.999999999999999e-36  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.978109  n/a   
 
 
-
 
NC_013132  Cpin_3892  hypothetical protein  31.46 
 
 
421 aa  115  2.0000000000000002e-24  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.0353742 
 
 
-
 
NC_009338  Mflv_2917  HK97 family phage prohead protease  25.35 
 
 
579 aa  73.9  0.000000000004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.595306  normal  0.164671 
 
 
-
 
NC_009338  Mflv_3892  putative phage head  24.24 
 
 
414 aa  58.2  0.0000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.862088  normal  0.410951 
 
 
-
 
NC_014158  Tpau_3898  major capsid protein HK97  28.65 
 
 
279 aa  55.8  0.000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1254  HK97 family phage major capsid protein  26.39 
 
 
399 aa  51.6  0.00003  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2834  phage major capsid protein, HK97 family  29.27 
 
 
397 aa  50.4  0.00006  Clostridium cellulolyticum H10  Bacteria  normal  0.174812  n/a   
 
 
-
 
NC_003909  BCE_0400  HK97 family phage major capsid protein  29.81 
 
 
397 aa  49.3  0.0001  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0627  phage major capsid protein, HK97 family  25.93 
 
 
368 aa  47  0.0007  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
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