8 homologs were found in PanDaTox collection
for query gene PputGB1_3402 on replicon NC_010322
Organism: Pseudomonas putida GB-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010322  PputGB1_3402  Arc domain-containing protein  100 
 
 		 135 aa  270  6e-72  Pseudomonas putida GB-1  Bacteria  hitchhiker  0.000582417  unclonable  1.23131e-16 
 
 
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NC_012560  Avin_51750  hypothetical protein  51.02 
 
 		 107 aa  52.4  0.000002  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
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NC_012858  Rleg_7066  Arc domain protein DNA binding domain protein  41.51 
 
 		 90 aa  49.7  0.00001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  hitchhiker  0.000570212  normal  1 
 
 
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NC_010322  PputGB1_3401  Arc domain-containing protein  58.33 
 
 		 52 aa  49.3  0.00002  Pseudomonas putida GB-1  Bacteria  hitchhiker  0.000104471  unclonable  9.66468e-17 
 
 
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NC_008752  Aave_1717  Arc domain-containing protein  52.27 
 
 		 178 aa  48.1  0.00004  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.000000298141  unclonable  0.0000000100109 
 
 
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NC_010002  Daci_2124  Arc domain-containing protein  46.51 
 
 		 109 aa  47.8  0.00005  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.044305 
 
 
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NC_012560  Avin_49930  hypothetical protein  33.65 
 
 		 109 aa  46.2  0.0001  Azotobacter vinelandii DJ  Bacteria  normal  0.72043  n/a   
 
 
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NC_008463  PA14_20290  DNA binding-protein  37.5 
 
 		 108 aa  40.8  0.006  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0669887  normal  0.454428 
 
 
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