97 homologs were found in PanDaTox collection
for query gene PputGB1_2439 on replicon NC_010322
Organism: Pseudomonas putida GB-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010322  PputGB1_2439  triphosphoribosyl-dephospho-CoA synthase  100 
 
 
301 aa  588  1e-167  Pseudomonas putida GB-1  Bacteria  normal  0.045617  normal 
 
 
-
 
NC_010501  PputW619_2882  triphosphoribosyl-dephospho-CoA synthase  78.31 
 
 
312 aa  436  1e-121  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_02560  triphosphoribosyl-dephospho-CoA synthase  70.41 
 
 
293 aa  328  5.0000000000000004e-89  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0205763  normal 
 
 
-
 
NC_004578  PSPTO_5086  2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme- A synthase  65.68 
 
 
291 aa  327  1.0000000000000001e-88  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0443  triphosphoribosyl-dephospho-CoA synthase  66.42 
 
 
291 aa  326  3e-88  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5301  triphosphoribosyl-dephospho-CoA synthase  67.31 
 
 
290 aa  325  5e-88  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.206727  normal  0.252683 
 
 
-
 
NC_012560  Avin_10290  triphosphoribosyl-dephospho-CoA synthase  65.57 
 
 
292 aa  317  2e-85  Azotobacter vinelandii DJ  Bacteria  hitchhiker  0.00426102  n/a   
 
 
-
 
NC_009656  PSPA7_0293  triphosphoribosyl-dephospho-CoA synthase  70.79 
 
 
293 aa  308  5.9999999999999995e-83  Pseudomonas aeruginosa PA7  Bacteria  normal  0.417783  n/a   
 
 
-
 
NC_007925  RPC_4592  triphosphoribosyl-dephospho-CoA synthase  52.77 
 
 
315 aa  253  3e-66  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1246  triphosphoribosyl-dephospho-CoA synthase MdcB  57.41 
 
 
284 aa  245  6.999999999999999e-64  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4926  triphosphoribosyl-dephospho-CoA synthase  55.23 
 
 
314 aa  241  1e-62  Ralstonia eutropha JMP134  Bacteria  normal  0.82021  n/a   
 
 
-
 
NC_007952  Bxe_B1845  triphosphoribosyl-dephospho-CoA synthase  54.72 
 
 
300 aa  229  4e-59  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0473593 
 
 
-
 
NC_010676  Bphyt_4820  triphosphoribosyl-dephospho-CoA synthase  55.85 
 
 
307 aa  229  4e-59  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0479004  normal  0.0163783 
 
 
-
 
NC_010623  Bphy_5086  triphosphoribosyl-dephospho-CoA synthase  52.92 
 
 
316 aa  225  9e-58  Burkholderia phymatum STM815  Bacteria  normal  0.242748  normal  0.0919375 
 
 
-
 
NC_008709  Ping_3658  triphosphoribosyl-dephospho-CoA synthase  49.43 
 
 
292 aa  224  2e-57  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_0947  triphosphoribosyl-dephospho-CoA synthase  55.26 
 
 
294 aa  221  9.999999999999999e-57  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.908595  normal 
 
 
-
 
NC_012912  Dd1591_2611  triphosphoribosyl-dephospho-CoA synthase MdcB  53.15 
 
 
285 aa  221  1.9999999999999999e-56  Dickeya zeae Ech1591  Bacteria  normal  0.16328  n/a   
 
 
-
 
NC_012857  Rpic12D_3864  triphosphoribosyl-dephospho-CoA synthase  53.14 
 
 
309 aa  213  2.9999999999999995e-54  Ralstonia pickettii 12D  Bacteria  normal  0.516158  normal 
 
 
-
 
NC_010678  Rpic_4940  triphosphoribosyl-dephospho-CoA synthase  53.14 
 
 
309 aa  213  2.9999999999999995e-54  Ralstonia pickettii 12J  Bacteria  normal  normal  0.0941184 
 
 
-
 
NC_009436  Ent638_3778  triphosphoribosyl-dephospho-CoA synthase  55.65 
 
 
233 aa  210  2e-53  Enterobacter sp. 638  Bacteria  normal  normal  0.0120548 
 
 
-
 
NC_011899  Hore_04700  Triphosphoribosyl-dephospho-CoA synthase  32.99 
 
 
467 aa  161  1e-38  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1164  triphosphoribosyl-dephospho-CoA synthase MdcB  42.01 
 
 
288 aa  147  2.0000000000000003e-34  Burkholderia ambifaria MC40-6  Bacteria  normal  0.198403  normal  0.179509 
 
 
-
 
NC_008390  Bamb_1152  triphosphoribosyl-dephospho-CoA synthase  41.7 
 
 
288 aa  145  7.0000000000000006e-34  Burkholderia ambifaria AMMD  Bacteria  normal  0.536064  n/a   
 
 
-
 
NC_010084  Bmul_2045  triphosphoribosyl-dephospho-CoA synthase MdcB  41.85 
 
 
289 aa  143  3e-33  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_4015  triphosphoribosyl-dephospho-CoA protein  41.41 
 
 
297 aa  142  9e-33  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3156  triphosphoribosyl-dephospho-CoA synthase MdcB  41.35 
 
 
287 aa  142  9e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1246  triphosphoribosyl-dephospho-CoA synthase MdcB  41.54 
 
 
288 aa  141  9.999999999999999e-33  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0788656 
 
 
-
 
NC_010658  SbBS512_E0527  triphosphoribosyl-dephospho-CoA synthase  39.13 
 
 
292 aa  138  8.999999999999999e-32  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A4417  triphosphoribosyl-dephospho-CoA synthase  40.59 
 
 
288 aa  138  8.999999999999999e-32  Burkholderia sp. 383  Bacteria  normal  0.234265  normal 
 
 
-
 
NC_007204  Psyc_1141  ATP:dephospho-CoA triphosphoribosyl transferase  33.33 
 
 
295 aa  138  1e-31  Psychrobacter arcticus 273-4  Bacteria  normal  0.0392227  normal  0.36421 
 
 
-
 
NC_011353  ECH74115_0701  triphosphoribosyl-dephospho-CoA synthase  39.13 
 
 
290 aa  136  4e-31  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_0632  triphosphoribosyl-dephospho-CoA synthase  39.56 
 
 
292 aa  136  4e-31  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_3031  triphosphoribosyl-dephospho-CoA synthase  39.56 
 
 
292 aa  136  4e-31  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
CP001637  EcDH1_3012  triphosphoribosyl-dephospho-CoA synthase CitG  39.56 
 
 
292 aa  136  4e-31  Escherichia coli DH1  Bacteria  normal  0.139818  n/a   
 
 
-
 
CP001509  ECD_00581  triphosphoribosyl-dephospho-CoA transferase  39.56 
 
 
292 aa  136  4e-31  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A0778  triphosphoribosyl-dephospho-CoA synthase  41.26 
 
 
297 aa  136  4e-31  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.843042  normal  0.796929 
 
 
-
 
NC_009800  EcHS_A0664  triphosphoribosyl-dephospho-CoA synthase  39.56 
 
 
292 aa  136  4e-31  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_00570  hypothetical protein  39.56 
 
 
292 aa  136  4e-31  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2030  triphosphoribosyl-dephospho-CoA synthase CitG  38.41 
 
 
301 aa  136  5e-31  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_0793  triphosphoribosyl-dephospho-CoA synthase  40.22 
 
 
288 aa  136  5e-31  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.501312  n/a   
 
 
-
 
NC_008542  Bcen2424_1274  triphosphoribosyl-dephospho-CoA synthase  40.22 
 
 
288 aa  136  5e-31  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0492146  n/a   
 
 
-
 
NC_011205  SeD_A0719  triphosphoribosyl-dephospho-CoA synthase  41.26 
 
 
297 aa  136  5e-31  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.647877  normal 
 
 
-
 
NC_009801  EcE24377A_0635  triphosphoribosyl-dephospho-CoA synthase  39.19 
 
 
292 aa  135  9.999999999999999e-31  Escherichia coli E24377A  Bacteria  normal  0.474806  n/a   
 
 
-
 
NC_009457  VC0395_A0328  triphosphoribosyl-dephospho-CoA synthase CitG  36 
 
 
286 aa  134  1.9999999999999998e-30  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_4291  triphosphoribosyl-dephospho-CoA synthase  41.76 
 
 
278 aa  134  1.9999999999999998e-30  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1757  triphosphoribosyl-dephospho-CoA synthase CitG  39.22 
 
 
301 aa  134  1.9999999999999998e-30  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3166  triphosphoribosyl-dephospho-CoA synthase  36.9 
 
 
294 aa  132  9e-30  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2317  triphosphoribosyl-dephospho-CoA synthase CitG  36.69 
 
 
302 aa  132  1.0000000000000001e-29  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_3187  triphosphoribosyl-dephospho-CoA synthase MdcB  40.89 
 
 
309 aa  130  4.0000000000000003e-29  Methylocella silvestris BL2  Bacteria  n/a    normal  0.632507 
 
 
-
 
NC_011083  SeHA_C0732  triphosphoribosyl-dephospho-CoA synthase  41.26 
 
 
297 aa  129  5.0000000000000004e-29  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A0673  triphosphoribosyl-dephospho-CoA synthase  41.26 
 
 
298 aa  129  6e-29  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B0659  triphosphoribosyl-dephospho-CoA synthase  40.91 
 
 
297 aa  128  1.0000000000000001e-28  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1319  triphosphoribosyl-dephospho-CoA synthase  38.26 
 
 
307 aa  127  3e-28  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B0070  triphosphoribosyl-dephospho-CoA synthase CitG  37.99 
 
 
302 aa  125  6e-28  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C0067  triphosphoribosyl-dephospho-CoA synthase CitG  37.99 
 
 
302 aa  125  8.000000000000001e-28  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A0068  triphosphoribosyl-dephospho-CoA synthase CitG  37.99 
 
 
302 aa  125  8.000000000000001e-28  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.499675 
 
 
-
 
NC_011080  SNSL254_A0068  triphosphoribosyl-dephospho-CoA synthase CitG  37.99 
 
 
302 aa  125  8.000000000000001e-28  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A0069  triphosphoribosyl-dephospho-CoA synthase CitG  37.99 
 
 
302 aa  125  8.000000000000001e-28  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.749123  normal 
 
 
-
 
NC_007908  Rfer_2405  triphosphoribosyl-dephospho-CoA synthase  35.02 
 
 
302 aa  125  1e-27  Rhodoferax ferrireducens T118  Bacteria  normal  0.146985  n/a   
 
 
-
 
NC_007908  Rfer_1848  triphosphoribosyl-dephospho-CoA synthase  38.06 
 
 
318 aa  122  9e-27  Rhodoferax ferrireducens T118  Bacteria  normal  0.351206  n/a   
 
 
-
 
NC_010002  Daci_1763  triphosphoribosyl-dephospho-CoA synthase  37.73 
 
 
286 aa  119  7e-26  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008528  OEOE_0425  triphosphoribosyl-dephospho-CoA synthase  31.7 
 
 
274 aa  119  9e-26  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2215  triphosphoribosyl-dephospho-CoA synthase CitG  38.81 
 
 
297 aa  118  9.999999999999999e-26  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0030  triphosphoribosyl-dephospho-CoA synthase MdcB  40.38 
 
 
286 aa  117  1.9999999999999998e-25  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0747254  normal 
 
 
-
 
NC_008825  Mpe_A0789  triphosphoribosyl-dephospho-CoA synthase  41.67 
 
 
286 aa  117  3e-25  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.000225089  normal 
 
 
-
 
NC_007778  RPB_3301  triphosphoribosyl-dephospho-CoA synthase  35.27 
 
 
320 aa  115  6e-25  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.669404 
 
 
-
 
NC_010172  Mext_0029  triphosphoribosyl-dephospho-CoA synthase MdcB  40 
 
 
286 aa  115  1.0000000000000001e-24  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_3370  triphosphoribosyl-dephospho-CoA synthase  36.03 
 
 
281 aa  114  2.0000000000000002e-24  Enterobacter sp. 638  Bacteria  normal  normal  0.0900334 
 
 
-
 
NC_010505  Mrad2831_0351  triphosphoribosyl-dephospho-CoA synthase MdcB  36.33 
 
 
322 aa  114  3e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0398737  normal 
 
 
-
 
NC_010524  Lcho_0074  triphosphoribosyl-dephospho-CoA synthase MdcB  38.95 
 
 
295 aa  110  3e-23  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010725  Mpop_0051  triphosphoribosyl-dephospho-CoA synthase MdcB  40.39 
 
 
286 aa  110  3e-23  Methylobacterium populi BJ001  Bacteria  normal  0.32958  normal  0.107341 
 
 
-
 
NC_007651  BTH_I2798  ATP:dephospho-CoA triphosphoribosyl transferase  41.51 
 
 
330 aa  108  8.000000000000001e-23  Burkholderia thailandensis E264  Bacteria  normal  0.160388  n/a   
 
 
-
 
NC_007925  RPC_1054  triphosphoribosyl-dephospho-CoA synthase  36.26 
 
 
300 aa  108  9.000000000000001e-23  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_006368  lpp2497  hypothetical protein  32.13 
 
 
280 aa  107  2e-22  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_010511  M446_6852  triphosphoribosyl-dephospho-CoA synthase MdcB  39.53 
 
 
285 aa  105  8e-22  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_1161  triphosphoribosyl-dephospho-CoA synthase  27.84 
 
 
286 aa  105  9e-22  Clostridium perfringens SM101  Bacteria  normal  0.0451951  n/a   
 
 
-
 
NC_008786  Veis_2891  triphosphoribosyl-dephospho-CoA synthase  35.76 
 
 
334 aa  104  1e-21  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0666841  normal  0.0740235 
 
 
-
 
NC_009074  BURPS668_1457  triphosphoribosyl-dephospho-CoA synthase MdcB  41.61 
 
 
452 aa  101  1e-20  Burkholderia pseudomallei 668  Bacteria  normal  0.0818949  n/a   
 
 
-
 
NC_011071  Smal_1076  triphosphoribosyl-dephospho-CoA synthase MdcB  36.59 
 
 
285 aa  100  3e-20  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_5369  Triphosphoribosyl-dephospho-CoA synthase  36.27 
 
 
287 aa  99.4  7e-20  Variovorax paradoxus S110  Bacteria  normal  0.193045  n/a   
 
 
-
 
NC_008836  BMA10229_A0609  triphosphoribosyl-dephospho-CoA synthase  41.76 
 
 
705 aa  97.1  3e-19  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1261  triphosphoribosyl-dephospho-CoA synthase  41.76 
 
 
714 aa  97.1  3e-19  Burkholderia mallei SAVP1  Bacteria  normal  0.111669  n/a   
 
 
-
 
NC_006348  BMA3032  triphosphoribosyl-dephospho-CoA synthase  41.76 
 
 
356 aa  97.4  3e-19  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0544  triphosphoribosyl-dephospho-CoA synthase MdcB  41.76 
 
 
356 aa  97.4  3e-19  Burkholderia mallei NCTC 10247  Bacteria  normal  0.687698  n/a   
 
 
-
 
NC_013522  Taci_0595  Triphosphoribosyl-dephospho-CoA synthase  34.16 
 
 
317 aa  96.3  5e-19  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1589  triphosphoribosyl-dephospho-CoA synthase  41.39 
 
 
426 aa  96.3  6e-19  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1487  triphosphoribosyl-dephospho-CoA synthase  41.39 
 
 
431 aa  95.9  8e-19  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3856  triphosphoribosyl-dephospho-CoA protein  33.86 
 
 
272 aa  90.9  2e-17  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3941  Triphosphoribosyl-dephospho-CoA synthase  35.89 
 
 
272 aa  91.3  2e-17  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000239715 
 
 
-
 
NC_008825  Mpe_A2891  triphosphoribosyl-dephospho-CoA synthase  37.69 
 
 
235 aa  85.9  7e-16  Methylibium petroleiphilum PM1  Bacteria  normal  0.467581  normal 
 
 
-
 
NC_008609  Ppro_0451  triphosphoribosyl-dephospho-CoA protein  29.39 
 
 
339 aa  82.8  0.000000000000006  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0320145  n/a   
 
 
-
 
NC_002939  GSU0806  ATP:dephospho-CoA triphosphoribosyl transferase  28.81 
 
 
273 aa  79.3  0.00000000000008  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0190  triphosphoribosyl-dephospho-CoA protein  30.18 
 
 
267 aa  70.5  0.00000000003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0172  triphosphoribosyl-dephospho-CoA protein  30.18 
 
 
267 aa  68.6  0.0000000001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000510729 
 
 
-
 
NC_002967  TDE1523  citXG protein, putative  25.21 
 
 
471 aa  64.3  0.000000003  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_5782  triphosphoribosyl-dephospho-CoA protein  37.04 
 
 
286 aa  46.6  0.0005  Methylobacterium sp. 4-46  Bacteria  normal  0.0439498  normal 
 
 
-
 
NC_008553  Mthe_0767  triphosphoribosyl-dephospho-CoA protein  32.67 
 
 
288 aa  44.7  0.002  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
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