17 homologs were found in PanDaTox collection
for query gene Ppro_1275 on replicon NC_008609
Organism: Pelobacter propionicus DSM 2379



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008609  Ppro_1275  putative transcriptional regulator  100 
 
 
124 aa  257  4e-68  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009051  Memar_0868  putative transcriptional regulator  44.12 
 
 
454 aa  100  8e-21  Methanoculleus marisnigri JR1  Archaea  decreased coverage  0.00767556  n/a   
 
 
-
 
NC_002977  MCA1892  hypothetical protein  64 
 
 
382 aa  62.4  0.000000002  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2526  putative transcriptional regulator  58 
 
 
391 aa  60.5  0.000000007  Acidovorax sp. JS42  Bacteria  normal  decreased coverage  0.0000101247 
 
 
-
 
NC_007514  Cag_0657  putative transcriptional regulator  50 
 
 
385 aa  49.7  0.00001  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.194476  n/a   
 
 
-
 
NC_011663  Sbal223_3472  filamentation induced by cAMP protein Fic  41.67 
 
 
333 aa  48.9  0.00002  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_007514  Cag_0664  putative transcriptional regulator  50 
 
 
299 aa  48.5  0.00003  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE2641  Fic family protein  31.37 
 
 
328 aa  47.8  0.00005  Treponema denticola ATCC 35405  Bacteria  unclonable  0.000000103829  n/a   
 
 
-
 
NC_009943  Dole_0250  putative transcriptional regulator  42.31 
 
 
383 aa  47.8  0.00005  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1955  filamentation induced by cAMP protein Fic  40 
 
 
333 aa  47  0.00008  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.484154  n/a   
 
 
-
 
NC_007514  Cag_1101  putative transcriptional regulator  46 
 
 
402 aa  43.5  0.0009  Chlorobium chlorochromatii CaD3  Bacteria  decreased coverage  0.0000119822  n/a   
 
 
-
 
NC_007955  Mbur_0482  divergent AAA ATP  35.71 
 
 
475 aa  43.5  0.0009  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_010816  BLD_1961  putative transcriptional regulator  40.38 
 
 
515 aa  43.5  0.0009  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0490  putative transcriptional regulator  30.12 
 
 
504 aa  42.4  0.002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0362004 
 
 
-
 
NC_008609  Ppro_1856  Fis family transcriptional regulator  39.22 
 
 
328 aa  41.6  0.003  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_1397  filamentation induced by cAMP protein Fic  36.54 
 
 
316 aa  41.6  0.003  Eggerthella lenta DSM 2243  Bacteria  normal  0.93843  normal 
 
 
-
 
NC_013743  Htur_0320  transcriptional regulator, TrmB  28.95 
 
 
127 aa  40.4  0.009  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
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