15 homologs were found in PanDaTox collection
for query gene Ppha_2542 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011060  Ppha_2542  bacteriochlorophyll C binding protein  100 
 
 
85 aa  177  5.999999999999999e-44  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_0231  bacteriochlorophyll C binding protein  69.41 
 
 
83 aa  131  3.9999999999999996e-30  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_2359  bacteriochlorophyll C binding protein  68.24 
 
 
85 aa  129  2.0000000000000002e-29  Chlorobium limicola DSM 245  Bacteria  normal  0.25226  n/a   
 
 
-
 
NC_007512  Plut_2013  chlorosome envelope protein E  65.88 
 
 
85 aa  127  6e-29  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.41812 
 
 
-
 
NC_008639  Cpha266_0207  bacteriochlorophyll C binding protein  71.08 
 
 
83 aa  124  4.0000000000000003e-28  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0250  chlorosome envelope protein E  68.24 
 
 
87 aa  114  3.9999999999999997e-25  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0939  chlorosome envelope protein E  61.45 
 
 
85 aa  112  1.0000000000000001e-24  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.414323 
 
 
-
 
NC_010831  Cphamn1_0260  bacteriochlorophyll C binding protein  56.47 
 
 
84 aa  106  9.000000000000001e-23  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.456506  normal 
 
 
-
 
NC_007512  Plut_0265  chlorosome envelope protein A  42.31 
 
 
80 aa  66.2  0.0000000001  Chlorobium luteolum DSM 273  Bacteria  unclonable  0.0000000000105111  normal 
 
 
-
 
NC_007514  Cag_0219  chlorosome envelope protein A  42.31 
 
 
80 aa  66.2  0.0000000001  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.540959  n/a   
 
 
-
 
NC_011060  Ppha_2572  bacteriochlorophyll C binding protein  41.25 
 
 
80 aa  66.6  0.0000000001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  decreased coverage  0.000646673  n/a   
 
 
-
 
NC_010803  Clim_2145  bacteriochlorophyll C binding protein  43.59 
 
 
80 aa  56.6  0.0000001  Chlorobium limicola DSM 245  Bacteria  normal  0.0310736  n/a   
 
 
-
 
NC_011059  Paes_1960  bacteriochlorophyll C binding protein  41.03 
 
 
81 aa  52.4  0.000002  Prosthecochloris aestuarii DSM 271  Bacteria  decreased coverage  0.00000000021808  normal 
 
 
-
 
NC_008639  Cpha266_2299  bacteriochlorophyll C binding protein  39.74 
 
 
81 aa  51.6  0.000004  Chlorobium phaeobacteroides DSM 266  Bacteria  hitchhiker  0.000000633498  n/a   
 
 
-
 
NC_010831  Cphamn1_2195  bacteriochlorophyll C binding protein  41.03 
 
 
81 aa  51.2  0.000004  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.574411 
 
 
-
 
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